Bioconductor Msigdb

Showing : msigdb • reset

votes

replies

1.1k

views

GSEABase fgsea msigdb GeneSetEnrichment

12 months ago Assa Yeroslaviz ★ 1.5k

votes

replies

498

views

msigdb fgsea msig

14 months ago Tanvi • 0

votes

replies

956

views

geneset GeneSetEnrichment msigdb

17 months ago Seongsu • 0

votes

replies

1.1k

views

msigdb gmt GSEA

written 17 months ago by Georg • 0

votes

replies

4.5k

views

ssgsea GSVA biotype proteincoding msigdb

updated 11 months ago by tifaGis • 0 • written 21 months ago by snijesh ▴ 200

vote

2.4k

views

msigdb GSEABase GSVA

updated 3.4 years ago by Robert Castelo ★ 3.4k • written 3.4 years ago by forlani.luca • 0

vote

2.5k

views

gseabase msigdb genesetcollection Tutorial

written 7.2 years ago by t.kuilman ▴ 170

votes

replies

5.3k

views

clusterprofiler GSEA MSIGDB

updated 7.5 years ago by Guangchuang Yu ★ 1.2k • written 7.5 years ago by thomasjenner333 • 0

vote

replies

1.7k

views

limma romer msigdb

updated 10.0 years ago by James W. MacDonald 68k • written 10.0 years ago by Jon Manning ▴ 40

votes

replies

1.6k

views

category gostats msigdb hypergeometric test

10.1 years ago petyuk ▴ 70

10 results • Page 1 of 1

Recent ...

Replies

Comment: EuroBioC2024 abstract submission is open! by Finnianfly • 0

What specific requirements should be noted when preparing abstracts for presentation formats such as short talks, package demos, or posters…

Comment: Length of 'dimnames' [1] not equal to array extent by Francesco Silvestro • 0

Resolved the error message!

Comment: WGCNA analysis on RNAseq and proteoimcs data by sum31278 • 0

Hi sagigordon, Can you share how you performed WGCNA analysis for proteomics data? Thanks

Comment: European Bioconductor Conference 2023 planning by inadequate.peacock.iiag • 0

I once faced a dilemma similar to this when coordinating a smaller local event; despite initial hesitation, I learned invaluable skills and…

Comment: ROAST compare results with complex design by Gordon Smyth 52k

It's also worth pointing out that the syntax for `camera` and `mroast` is the same, so I wonder how OP did the earlier `camera` analysis.

Votes

Answer: ROAST compare results with complex design

How to account for solvent controls in DESeq2 when comparing follicular vs luteal phase?

Answer: How to account for solvent controls in DESeq2 when comparing follicular vs lutea

Comment: Using DESeq2 on single cell RNA Seq data of same cell type but different conditi

Awards • All