Bioconductor Msigdb

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1.3k

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GSEABase fgsea msigdb GeneSetEnrichment

16 months ago Assa Yeroslaviz ★ 1.5k

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603

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msigdb fgsea msig

19 months ago Tanvi • 0

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1.1k

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geneset GeneSetEnrichment msigdb

21 months ago Seongsu • 0

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1.4k

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msigdb gmt GSEA

written 22 months ago by Georg • 0

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5.5k

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ssgsea GSVA biotype proteincoding msigdb

updated 15 months ago by tifaGis • 0 • written 2.1 years ago by snijesh ▴ 200

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2.6k

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msigdb GSEABase GSVA

updated 3.8 years ago by Robert Castelo ★ 3.4k • written 3.8 years ago by forlani.luca • 0

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2.7k

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gseabase msigdb genesetcollection Tutorial

written 7.6 years ago by t.kuilman ▴ 170

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5.6k

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clusterprofiler GSEA MSIGDB

updated 7.8 years ago by Guangchuang Yu ★ 1.2k • written 7.8 years ago by thomasjenner333 • 0

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1.8k

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limma romer msigdb

updated 10.4 years ago by James W. MacDonald 68k • written 10.4 years ago by Jon Manning ▴ 40

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1.7k

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category gostats msigdb hypergeometric test

10.4 years ago petyuk ▴ 70

10 results • Page 1 of 1

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Comment: Incosistencies in buildSNNGraph() function by ATpoint ★ 5.0k

Just played with this a bit and I think it comes down to not having a fixed seed before running the leiden thingy. Same goes for PCA and UM…

Answer: Incosistencies in buildSNNGraph() function by Aaron Lun ★ 29k

The most obvious thing that comes to mind is the RNG seed. `cluster_leiden()` does some random number generation, somewhere deep in the **i…

Comment: Opportunity to host EuroBioC2026 Preconference workshops! by TikTsokaas33ocissalpc • 0

Thank you for sharing the EuroBioC2026 workshop opportunity. I m interested in hosting a hands on session teaching reproducible data analys…

Comment: Ensembl plants at annotationHub? by jwp48 • 0

Nope I don't mind haha! Anyway thanks so much! Thats super kind of you!

Answer: Combining two proteomics datasets with limpa by Gordon Smyth 53k

Hi Andrew, We don't have that much experience combining different datasets with limpa yet, but my feeling is that the same DPC should be u…

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Answer: Incosistencies in buildSNNGraph() function

Answer: Where do the filename come from in the LOLA datasets?

Bioconductor Maintainer Application

A: What is logFC and "B" in methylation analysis ??

limma moderated t-statistics and B-statistics

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Popular Question to Lluís Revilla Sancho ▴ 760