Bioconductor Ncrna

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computational biology molecular biology RNA r-loop ncRNA Job

7.2 years ago l.brown ▴ 10

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2.2k

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grch37 transcripts biotype biomaRt ncrna

updated 7.4 years ago by James W. MacDonald 68k • written 7.4 years ago by sergio.martinezcuesta ▴ 10

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gsea ncrna coexpression gene set analysis gene set testing

9.7 years ago m.fletcher ▴ 20

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1.5k

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biomart ncrna

updated 10.3 years ago by Thomas Maurel ▴ 800 • written 10.3 years ago by Zhang,Jiexin ▴ 20

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trna ncrna genomicfeatures featuredb biomart

updated 10.8 years ago by Hervé Pagès 16k • written 10.8 years ago by Keith Hughitt ▴ 180

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Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Martin Morgan 25k

I see rstudioapi in the `sessionInfo()`. RStudio does not support forked ('multicore') processes. Does the BiocParallel example work when y…

Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Michael Love 43k

Given that this is an issue with BiocParallel on your machine and we have a minimal reproducible example, you may want to repost the issue.…

Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by ATpoint ★ 5.0k

Yes, still it's not reproducible, yet hard to debug. I cannot reproduce myself either.

Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Benjamin • 0

Still happening using pre-existing size factors estimating dispersions gene-wise dispersion estimates: 15 workers mean-dis…

Answer: BiocParallel (and DESeq2) - wrong args for environment subassignment by Benjamin • 0

Still happening in a clean install

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Comment: limpa analysis advice

Answer: When to use edgeR or limma

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