Showing : pairwiseAlignment • reset
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Question about converting SAM alignment file data to a visual text alignment (e.g., resembling blastn alignment)
SAM samtools pairwisealignment alignment blastn
7.2 years ago ktehmsen • 0
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3
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2.0k
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How to find multiple overlaps with pairwiseAlignment()?
biostrings pairwisealignment
updated 7.8 years ago by 16k • written 7.8 years ago by ▴ 10
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4
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1.9k
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Query with Biostrings pairwise alignment output positon
biostrings alignment pairwisealignment
updated 7.9 years ago by 16k • written 7.9 years ago by • 0
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2
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4.4k
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Calculate the number of SNP differences between sequences in multiple alignment
pairwisealignment SNP dnasequence
8.7 years ago lordbleys • 0
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1.4k
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Translate to aminoacid, align pairwise and un-translate back to DNA
translation pairwisealignment
9.2 years ago igferres • 0
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1.2k
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Mapping sequence features to alignments
pairwisealignment indel
updated 9.3 years ago by 16k • written 9.3 years ago by ▴ 10
3
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3
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2.3k
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pairwiseAlignments coordinate mapping?
biostrings pairwisealignment
updated 5 months ago by ▴ 20 • written 9.4 years ago by ★ 13k
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1
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1.4k
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Error in score() function on pairwiseAlignment()
biostrings pairwisealignment
updated 9.5 years ago by 4.2k • written 9.5 years ago by • 0
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1
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1.6k
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pairwiseAlignment() - Similarity NA% ?
biostrings pairwisealignment
updated 10.0 years ago by 16k • written 10.1 years ago by • 0
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3
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1.5k
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indels located at the edges of subject and Biostrings pairwiseAlignment function
pairwisealignment biostrings
10.1 years ago vincent.plagnol ▴ 10
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inconsistent pairwiseAlignment behaviour (Biostrings) with multiple alignments with identical scores
biostrings pairwisealignment
10.1 years ago vincent.plagnol ▴ 10
4
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5
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3.4k
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global alignment in Biostrings , Memory fails when seq. lengths around 50K bp
Biostrings pairwiseAlignment
updated 11.0 years ago by 16k • written 11.0 years ago by ▴ 120
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