Bioconductor PairwiseAlignment

Showing : pairwiseAlignment • reset

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SAM samtools pairwisealignment alignment blastn

6.4 years ago ktehmsen • 0

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biostrings pairwisealignment

updated 6.9 years ago by Hervé Pagès 16k • written 6.9 years ago by kgorczak ▴ 10

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biostrings alignment pairwisealignment

updated 7.0 years ago by Hervé Pagès 16k • written 7.0 years ago by dhwani2410 • 0

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pairwisealignment SNP dnasequence

7.9 years ago lordbleys • 0

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translation pairwisealignment

8.4 years ago igferres • 0

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1.1k

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pairwisealignment indel

updated 8.5 years ago by Hervé Pagès 16k • written 8.5 years ago by oliwindram ▴ 10

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1.6k

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biostrings pairwisealignment

updated 8.6 years ago by Hervé Pagès 16k • written 8.6 years ago by Steve Lianoglou ★ 13k

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1.2k

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biostrings pairwisealignment

updated 8.6 years ago by shepherl 4.1k • written 8.6 years ago by jdydu • 0

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biostrings pairwisealignment

updated 9.2 years ago by Hervé Pagès 16k • written 9.2 years ago by boris.steipe • 0

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pairwisealignment biostrings

9.3 years ago • updated 9.2 years ago vincent.plagnol ▴ 10

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1.9k

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biostrings pairwisealignment

9.3 years ago vincent.plagnol ▴ 10

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3.0k

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Biostrings pairwiseAlignment

updated 10.1 years ago by Hervé Pagès 16k • written 10.2 years ago by branislav misovic ▴ 120

12 results • Page 1 of 1

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Comment: ChAMP.DMR error - Error in makeGenomicRatioSetFromMatrix by O'Brien • 0

Consult the ChAMP.DMR documentation for more information on supported array types and expected data formats: https://bioconductor.org/packa…

Answer: combining raw counts and estimated counts by O'Brien • 0

It is possible to combine raw counts from TCGA and estimated counts from GEO datasets (Kalisto pseudoalignment) while mitigating batch effe…

Comment: Packages don't update, but no error or warning is thrown by neighsanlo • 0

This is useful information.

Comment: Perform gene set enrichment analysis using fgsea on two conditions that don't ha by freemanmclaughlin9969289 • 0

Tools such as Pathway Analysis with Deweighting of Overlapping Genes ([block blast][1]) or Gene Set Enrichment Analysis for Single Cell RNA…

Comment: How to get around the warning message: mzR has been built against a different Rc by Nan • 0

Hello, I was wondering if you were able to resolve this issue? I've recently encountered a similar problem and would like to ask for your a…

Votes

Answer: Can DESeq2's design compensate for sequencing experimental design shortcomings?

Comment: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio

C: edgeR and lack of counts ID on CPM matrix

A: DESeq2 Following RSEM

A: importing RSEM data into DESeq2

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Teacher to dsull ▴ 40