Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
repitools
•
reset
0
votes
3
replies
2.9k
views
How to handle multi-TSS genes in Repitools?
repitools
promoter
tss
annotation
7.9 years ago
Ryan C. Thompson
★ 7.9k
1
vote
2
replies
1.9k
views
cpgDensityCalc function in Repitools giving contradictory tools
repitools
bioconductor
cpgDensityCalc
8.8 years ago
divyswar01
• 0
0
votes
0
replies
1.3k
views
Analysis of MBD-seq data without ssl control using BayMeth
Baymeth
methylation
MBD-seq
Repitools
9.7 years ago
pm2015
• 0
0
votes
0
replies
1.2k
views
SssI free analysis in BayMeth/Repitools
repitools
10.5 years ago
Matthias Lienhard
▴ 280
0
votes
0
replies
1.3k
views
Repitools - featureScores - mappability Bsgenome object
BSgenome
BSgenome
Repitools
BSgenome
BSgenome
Repitools
11.9 years ago
Dario Strbenac
★ 1.6k
0
votes
0
replies
1.6k
views
Repitools - featureScores - mappability Bsgenome object
BSgenome
BSgenome
Repitools
BSgenome
BSgenome
Repitools
12.0 years ago
Jaritz,Markus
▴ 20
0
votes
5
replies
2.8k
views
Graph of methylation data around TSS - Repitools or other package?
GO
Repitools
GO
Repitools
updated 12.2 years ago by
Dario Strbenac
★ 1.6k • written 12.2 years ago by
Tim Smith
★ 1.1k
0
votes
0
replies
1.3k
views
Analysing grouped datasets in repitools
limma
Repitools
limma
Repitools
12.9 years ago
Guest User
★ 13k
0
votes
21
replies
8.6k
views
BAM files to Genomic Ranges object
Alignment
convert
Repitools
Alignment
convert
Repitools
updated 2.2 years ago by
Marge
• 0 • written 13.1 years ago by
José Luis Lavín
▴ 280
0
votes
3
replies
2.2k
views
Repitools/ClusterPlots
BSgenome
BSgenome
Repitools
BSgenome
BSgenome
Repitools
updated 14.3 years ago by
Chao-Jen Wong
▴ 580 • written 14.3 years ago by
Guest User
★ 13k
10 results • Page
1 of 1
Recent ...
Replies
Comment: soGGi error
by
shepherl
4.3k
We have tried to contact the soGGi maintainer to have them update the package to the newer version of gglot2 but they have so far been unre…
Comment: using limma trend workflow in CAMERA
by
Gordon Smyth
53k
No, `trend.var=TRUE` and `trend=TRUE` are not needed in any voom pipeline, because the trend is already incorporated into the voom weights.
Comment: Questions about bacon QC and correction on EWAS results
by
Tikaaa2sahaaaq2c
• 0
In the world of mobile games, the 88ef game download has gained traction for its performance driven design [free download][1], similar to …
Comment: using limma trend workflow in CAMERA
by
A.Barden
▴ 20
Do you need to set trend.var=TRUE when using camera in the limma-voom pipeline with RNA-Seq data (as apposed to limma-trend pipeline)?
Comment: Upcoming Ensembl API and data access changes - new blog post available
by
Tikaaa2sahaaaq2c
• 0
Just as the Ensembl team transitions to a new platform for streamlined data access, diners can benefit from a digital newks menu prices con…
Votes
Answer: DiffBind differential analysis
Answer: Limma-voom sample weights and impact on DEG numbers
C: Why limma, edgeR, and DESeq did not implement fold change moderation first?
Comment: using limma trend workflow in CAMERA
C: z-score with DESeq2?
Awards
• All
Popular Question
to
Guido Hooiveld
★ 4.1k
Popular Question
to
shepherl
4.3k
Popular Question
to
Steve Lianoglou
★ 13k
Teacher
to
Michael Love
43k
Supporter
to
fl
▴ 20
Locations
• All
Barcelona, Spain,
10 minutes ago
The city by the bay,
26 minutes ago
Wageningen University, Wageningen, the Netherlands,
49 minutes ago
United States,
2 hours ago
United Kingdom,
2 hours ago
Traffic: 1054 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6