Bioconductor Rsqlite

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RSQLite org.Hs.eg.db

3.2 years ago chenghaomai • 0

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RSQLite lumi

4.0 years ago Rohmatul • 0

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987

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jaspar rsqlite

updated 6.7 years ago by James W. MacDonald 67k • written 6.7 years ago by m.d.shapiro • 0

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3.4k

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R RSQLite

updated 7.3 years ago by James W. MacDonald 67k • written 7.3 years ago by biostR ▴ 10

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1.5k

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reactome.db rsqlite

updated 7.8 years ago by willem.ligtenberg ▴ 150 • written 7.8 years ago by Lluís Revilla Sancho ▴ 760

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1.2k

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rsqlite

7.8 years ago ngrundmann • 0

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5.0k

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rsqlite bioconductor bioclite rcpp.h

updated 7.8 years ago by Martin Morgan 25k • written 7.8 years ago by conkline • 0

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1.3k

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oligo rsqlite pd.hta.2.0

updated 8.2 years ago by James W. MacDonald 67k • written 8.2 years ago by Vincent J. Carey, Jr. 6.7k

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1.6k

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org.hs.eg.db DBI rsqlite

updated 8.6 years ago by Martin Morgan 25k • written 8.6 years ago by Gordon Smyth 51k

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2.2k

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annotation annotationdbi rsqlite

9.7 years ago Ceca Bojic ▴ 10

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3.4k

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biocinstaller genomicfeatures rsqlite

updated 10.0 years ago by Dan Tenenbaum ★ 8.2k • written 10.0 years ago by vimartin • 0

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2.4k

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VariantAnnotation RSQLite

10.0 years ago remi.tournebize ▴ 10

12 results • Page 1 of 1

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Comment: [How to construct a model.matrix ] by kyj2226 • 0

Thanks to you, I learn a lot. Many thanks, Yujin.

Comment: How to extract phastcons score for all protein coding genes and lncRNAs using Ge by rania.alanany • 0

thank you for your advice, I posted separate post.

Comment: How to extract phastcons score for all protein coding genes and lncRNAs using Ge by Robert Castelo ★ 3.4k

Hi, this is a long comment thread on 4-year old post, please open a new post with you question. To increase the odds of getting useful answ…

Answer: DESeq2 rerun returns different results by ATpoint ★ 4.5k

DESeq2 is deterministic if you use same input, code and software versions. Make sure to version-control your environment by at least tracki…

Answer: [How to construct a model.matrix ] by Gordon Smyth 51k

> Initially, I simply used > `lm(Epigenetic_age ~ Age_group + Age + Sex + PC1 + PC2 + PC3 + PC4 + PC5 + B + CD4T + CD8T + Mono + NK + Neutr…

Votes

Answer: [How to construct a model.matrix ]

C: DESeq2 baseMean values for each sample

Comment: ColData and ERROR: rows did not converge in beta, labelled in mcols(object)$beta

A: Some questions for remove batch effect by using mnnCorrect

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