Showing : ruuid • reset
0
votes
8
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1.5k
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Ruuid had non-zero exit status
Ruuid Ruuid
updated 18.0 years ago by ★ 7.4k • written 18.0 years ago by ▴ 50
0
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6
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1.5k
views
Many missing GO terms from GOHyperG call using mgu74av2
GO Survival hgu95av2 mgu74av2 Ruuid annotate multtest affy graph annaffy RBGL GOstats
updated 18.9 years ago by ★ 7.4k • written 18.9 years ago by ★ 1.4k
0
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4
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2.0k
views
installation problem
Ruuid genefilter rhdf5 multtest affy graph Rgraphviz RBGL Ruuid genefilter rhdf5 affy
updated 20.6 years ago by 6.7k • written 20.6 years ago by ▴ 30
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4
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1.1k
views
Ruuid installation problems
Ruuid Ruuid
19.3 years ago raffaele calogero ▴ 500
0
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3
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1.3k
views
package Ruuid
Ruuid Ruuid
19.7 years ago Alberto Goldoni ▴ 360
0
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3
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1.4k
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Recent changes to Bioconductor packages
Microarray Ruuid graph limma EBarrays Microarray Ruuid graph limma EBarrays
20.2 years ago madman@jimmy.harvard.edu ▴ 850
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3
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1.3k
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Recent changes to Bioconductor packages
Biobase Ruuid DynDoc tkWidgets affy graph Rgraphviz AnnBuilder RBGL PROcess Biobase
21.1 years ago madman@jimmy.harvard.edu ▴ 850
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3
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1.2k
views
Rgraphviz install issues
Ruuid Rgraphviz Ruuid Rgraphviz
updated 19.7 years ago by ▴ 30 • written 19.7 years ago by ▴ 280
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3
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1.5k
views
Can not install Ruuid package in a linux server
Ruuid Ruuid
updated 13.3 years ago by 6.7k • written 13.3 years ago by ▴ 290
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2
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1.5k
views
problem loading affycoretools
Survival hgu95av2 Biobase Ruuid annotate genefilter multtest affydata graph limma gcrma
17.8 years ago Jenny Drnevich ★ 2.2k
0
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2
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1.6k
views
Problem installing graph package
Ruuid rhdf5 graph hexbin Rgraphviz Ruuid rhdf5 graph hexbin Rgraphviz
updated 19.6 years ago by ★ 5.5k • written 19.6 years ago by ▴ 50
0
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2
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936
views
Ruuid requires specific MAKEFLAGS setting on Fedora Core 2
Ruuid Rgraphviz PROcess Ruuid Rgraphviz PROcess
updated 19.0 years ago by ▴ 80 • written 19.0 years ago by ▴ 70
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2
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1.5k
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GGtools and GGBase installation problems
Infrastructure GUI Ruuid GGtools GGBase Infrastructure GUI Ruuid GGtools GGBase
updated 13.2 years ago by 6.7k • written 13.2 years ago by ▴ 460
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1
reply
1.8k
views
package ‘Ruuid’ is not available (as a binary package for R version 3.1.3)
ruuid biocinstaller
updated 9.0 years ago by ★ 13k • written 9.0 years ago by • 0
0
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1
reply
1.7k
views
Rv1.91 or v2.0.0 on MacOS 10.3.5
SAGE GO Kidney hgu95av2 hu6800 rae230a cdf Biobase Ruuid DynDoc annotate edd multtest
updated 19.6 years ago by ★ 5.5k • written 19.6 years ago by ▴ 100
0
votes
1
reply
919
views
ReadAffy question
GO Ruuid DynDoc annotate genefilter multtest tkWidgets reposTools affy widgetTools limma
updated 18.4 years ago by 66k • written 18.4 years ago by ▴ 890
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1
reply
1.3k
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[R] problem loading affycoretools - solved!
Biobase Ruuid genefilter multtest graph limma gcrma matchprobes affyPLM RBGL simpleaffy
updated 17.8 years ago by ★ 7.4k • written 17.8 years ago by ★ 2.2k
0
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1
reply
997
views
Error loading tcltk for tkWidgets and widgetTools on duo Intel Mac under OS X
Cancer Ruuid tkWidgets graph GOstats Cancer Ruuid tkWidgets graph GOstats
updated 16.9 years ago by ▴ 10 • written 16.9 years ago by ★ 7.4k
0
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1
reply
1.4k
views
GSEABase error in parsing msigdb_v2.5.xml
GO Infrastructure hgu95av2 Biobase Ruuid AnnotationDbi GO Infrastructure hgu95av2 Biobase
updated 16.0 years ago by 25k • written 16.0 years ago by ▴ 130
0
votes
1
reply
1.4k
views
Can not invoke Ruuid package in updated Mac OS X
Ruuid Ruuid
updated 13.3 years ago by 6.7k • written 13.3 years ago by ▴ 290
0
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0
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803
views
Ruuid: Can't install on OSF1
Ruuid Ruuid
19.6 years ago Michael Hoffman ▴ 30
0
votes
0
replies
883
views
Unable to load Ruuid in R 2.8.1
Ruuid Ruuid
15.4 years ago Daniel Klevebring ▴ 80
0
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0
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845
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PGSEA and Ruuid
Ruuid PGSEA Ruuid PGSEA
15.3 years ago Daniel Klevebring ▴ 80
0
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0
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1.1k
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blocking in limma gives an estimability problem
GO hgu95av2 Ruuid multtest affy graph limma RBGL qvalue Category affyio GO hgu95av2
18.0 years ago Pedro López Romero ▴ 360
0
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0
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1.3k
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error in loading affy (R 2.0), Thank you
Normalization GO Clustering moe430a moe430b probe Ruuid rhdf5 multtest affy graph limma
19.6 years ago Pintilie, Melania ▴ 50
0
votes
0
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918
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Error loading tcltk for tkWidgets and widgetTools on duo Intel Mac under OS X
Ruuid tkWidgets graph GOstats Ruuid tkWidgets graph GOstats
16.9 years ago Michael Parisi ▴ 10
0
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0
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783
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Win32 packages
Ruuid rhdf5 affyPLM RdbiPgSQL Ruuid rhdf5 affyPLM RdbiPgSQL
20.6 years ago Jeff Gentry ★ 3.9k
27 results • Page 1 of 1
Recent ...
Replies
Answer: Normalisation using clinical traits in RNA seq using DESeq2 by ATpoint ★ 4.2k
See the vignette, it's a FAQ: https://bioconductor.org/packages/devel/bioc/vignettes/DESeq2/inst/doc/DESeq2.html#why-after-vst-are-there-st…
Comment: More regions in union when increasing DBA$config$mergeOverlap by Ian D. ▴ 70
Please could you comment on this @rory
Comment: Using featureCounts with SAF annotation file gives "Error: only GTF files contai by Wei Shi ★ 3.6k
Your bam file names should be stored in a vector and then provided to the `files` parameter.
Comment: Volcano plot of scRNA-seq data not "centered" by Michael Love 42k
Agree with @atpoint Depending on the "groups" in single cell, the question of DE can be not well defined without inserting additional inf…
Answer: Volcano plot of scRNA-seq data not "centered" by ATpoint ★ 4.2k
Sounds like a normalization problem, but I am not sure how to help with that. Indeed you can use control genes, for example use the top 20%…
Votes
Answer: Not able to install any Bioconductor 3.18 package [unable to access index]
Answer: Documenting resources in an `ExperimentHub` package?
Answer: Not able to install any Bioconductor 3.18 package [unable to access index]
Seurat/DESeq2 - single cell RNA-seq differential expression
Seurat to SingleCellExperiment Converting error in MAC
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