Bioconductor Subset

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votes

1.3k

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R subset DifferentialExpression

updated 2.9 years ago by Basti ▴ 780 • written 2.9 years ago by Manav • 0

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1.9k

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VariantAnnotation subset ScanVcfParam

updated 5.4 years ago by Martin Morgan 25k • written 5.4 years ago by Dario Strbenac ★ 1.6k

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2.8k

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TxDb.Hsapiens.UCSC.hg38.knownGene subset TxDb object

6.4 years ago Ruichao.Zeng ▴ 20

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1.4k

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flowStats newbie split subset flowCore

7.0 years ago yulia.chupalova • 0

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2.7k

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deseq2 maplot subset

updated 7.6 years ago by Michael Love 43k • written 7.6 years ago by rbronste ▴ 60

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3.1k

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probe filter subset gene symbol affy

10.5 years ago alakatos ▴ 130

6 results • Page 1 of 1

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Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design by abaed • 0

Thank you so much for your helpful response! I have a follow-up question regarding preprocessing of the count matrix. Should steps like ge…

Comment: readDNAStringSet with non DNA characters by Aidan ▴ 60

I would try to avoid converting to and from `character` objects, you'll lose the main point of having objects as `XString`/`XStringSet`. `…

Comment: DESeq2 interactions by James W. MacDonald 68k

While it looks correct, that response came from a spam bot.

Comment: How to left_join a tidySummarizedExperiment with a GRanges object by seqnames an by Kateřina • 0

Thank you so much!

Answer: readDNAStringSet with non DNA characters by ATpoint ★ 4.9k

See `?readDNAStringSet` which will tell that for DNAStringSet only valid characters are allowed. You can use `BStringSet` (`readBStringSet(…

Votes

Answer: Guidance on limma for pseudobulk scRNA-seq with multi-factor design

Answer: How to left_join a tidySummarizedExperiment with a GRanges object by seqnames an

Answer: Limpa Pipeline Order

A: How barcode-plot enrichment is calculated?

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