Showing : time-series • reset
0
votes
2
replies
380
views
3-factor DESeq2 trime-series analysis
time-series DESeq2
updated 10 weeks ago by ★ 4.0k • written 4 months ago by • 0
1
vote
6
replies
3.9k
views
Time-series RNA-seq analysis using DESeq2
time-series DESeq2 RNASeq timecoursedata TimeCourse
updated 2.5 years ago by ★ 5.0k • written 2.5 years ago by • 0
0
votes
1
reply
1.2k
views
Interpreting results from DESeq2 time-series multifactorial data analysis
DESeq2 time-series timecoursedata timecourse multifactorial
updated 3.2 years ago by 43k • written 3.3 years ago by • 0
0
votes
2
replies
1.4k
views
R: problem with running time-series analysis software: Mfuzz
time-series mfuzz replace=FALSE
3.7 years ago soda ▴ 80
0
votes
1
reply
1.3k
views
DEseq2 to test half-life for time-series data
half-life DESeq2 time-series
updated 4.8 years ago by 43k • written 4.8 years ago by ▴ 10
0
votes
5
replies
2.8k
views
RNA-seq time course analysis with only one experimental condition
deseq2 cancer rna-seq time-series
6.6 years ago mah19 • 0
2
votes
10
replies
4.2k
views
Time-series analysis with DESeq2
deseq2 time-series design matrix edger
updated 7.0 years ago by 43k • written 7.0 years ago by ★ 1.5k
0
votes
3
replies
1.5k
views
time-series, no replicates, no control groupe
deseq2 time-series without replicate
updated 7.6 years ago by 43k • written 7.6 years ago by • 0
1
vote
4
replies
1.9k
views
Analysis Time course data using DESeq2
deseq2 timecourse multiple time points time-series
updated 7.6 years ago by 43k • written 7.6 years ago by • 0
1
vote
5
replies
2.0k
views
Time course DE analysis in DESeq2 with Wald test
DESeq2 time-series
updated 8.3 years ago by 43k • written 8.3 years ago by ▴ 10
10 results • Page 1 of 1
Recent ...
Replies
Comment: Error message that there is no package called Biobase by DamionLedner99 • 0
thanks for sharing!!! https://cran.r-project.org/
Comment: msmsTests, inconsistent sign between lFC.Av and LogFC by Ben • 0
Continued here due to posting difficulties: Extract from the results table: ``` Inhibitor Vehicle lFC.Av LogFC ... F1 0.0 27…
Answer: DESeq2 for 16S rRNA Analysis by James W. MacDonald 68k
The Wald test is only meant for comparison of two groups at a time, so it depends on what you mean by 'analyze across multiple groups at a …
Comment: MetaDE.pvalue: Error in xj[i]: invalid subscript type 'list' by varying.mastodon.isyn • 0
Oh, that error! I remember wrestling with that one for hours when I was first learning Python. Turns out I was trying to use a list itself …
Comment: Confirm that OpenStats will not be archived (pryr dependency) by Marina • 0
Thank you!
Votes
Answer: What happens to genes with low dispersion during dispersion shrinkage in DESeq2
Comment: Are transformed values from rlog /vst log2 normalized counts?
Answer: Are transformed values from rlog /vst log2 normalized counts?
A: DESeq2 normalization vs VST vs rlog
Answer: How to directly decet the outlier samples (libraries) in EdgeR pipeline
Awards • All
Teacher to Michael Love 43k
Supporter to fl ▴ 20
Popular Question to James W. MacDonald 68k
Popular Question to rcavalca ▴ 140
Popular Question to James Aiden • 0
Locations • All
USA, Los Angeles, USC, 56 minutes ago
United States, 1 hour ago
United States, 1 hour ago
WEHI, Melbourne, Australia, 1 hour ago
Pakistan, 1 hour ago
Traffic: 882 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6