Showing : time-series • reset
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3-factor DESeq2 trime-series analysis
time-series DESeq2
8 weeks ago gogeni5529 • 0
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6
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3.4k
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Time-series RNA-seq analysis using DESeq2
time-series DESeq2 RNASeq timecoursedata TimeCourse
updated 2.2 years ago by ★ 5.0k • written 2.2 years ago by • 0
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1
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Interpreting results from DESeq2 time-series multifactorial data analysis
DESeq2 time-series timecoursedata timecourse multifactorial
updated 2.9 years ago by 43k • written 3.0 years ago by • 0
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2
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1.3k
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R: problem with running time-series analysis software: Mfuzz
time-series mfuzz replace=FALSE
3.5 years ago soda ▴ 80
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1
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1.2k
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DEseq2 to test half-life for time-series data
half-life DESeq2 time-series
updated 4.6 years ago by 43k • written 4.6 years ago by ▴ 10
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5
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2.6k
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RNA-seq time course analysis with only one experimental condition
deseq2 cancer rna-seq time-series
6.3 years ago mah19 • 0
2
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10
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4.0k
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Time-series analysis with DESeq2
deseq2 time-series design matrix edger
updated 6.7 years ago by 43k • written 6.7 years ago by ★ 1.5k
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3
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1.4k
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time-series, no replicates, no control groupe
deseq2 time-series without replicate
updated 7.3 years ago by 43k • written 7.3 years ago by • 0
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4
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1.8k
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Analysis Time course data using DESeq2
deseq2 timecourse multiple time points time-series
updated 7.3 years ago by 43k • written 7.3 years ago by • 0
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5
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1.9k
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Time course DE analysis in DESeq2 with Wald test
DESeq2 time-series
updated 8.0 years ago by 43k • written 8.0 years ago by ▴ 10
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Comment: Issues with downloading biomaRt - SeqInfo and S4 Vectors by James W. MacDonald 68k
Note that `S4Vectors` contains source code, so you will also need to [install RTools first][1]. [1]: https://cran.r-project.org/bin/win…
Answer: Issues with downloading biomaRt - SeqInfo and S4 Vectors by shepherl 4.2k
Our windows binaries are currently lagging behind as we are currently do not have a windows builder. If you are on windows you can try ins…
Comment: Issues with downloading biomaRt - SeqInfo and S4 Vectors by shepherl 4.2k
Can you please provide your `sessionInfo()` after doing `library("S4Vectors")`
Comment: VariantAnnotation does escape = within header string quotes by Daniel Cameron ▴ 40
I'm just stripping the entire line as a workaround using `meta(header(vcf))$DRAGENCommandLine = NULL`. Not ideal but at least subsequent pa…
Comment: Setting up a DESeq2 Design with Paired Data by Alexander • 0
Hi Kevin, Firstly, thank you so much for not only a very prompt response, but one that is incredibly insightful and helps me learn DESeq2 …
Votes
Answer: DESeq2 design for haplotype MPRA
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Suppress warning in RHDF5 write
Answer: Suppress warning in RHDF5 write
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