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tom.kloter
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3
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Juliet Hannah
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360
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lluex.rova
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9.6 years ago
Dario Strbenac
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DHS
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written 9.9 years ago by
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5.3k
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3.0k
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160
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written 10.9 years ago by
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Recent ...
Replies
Comment: DESeq2 for candidate gene analysis
by
horrible.junglefowl.xkxi
•
0
The free online calculator has become an indispensable tool in our digital world. Its versatility, accessibility, and ease of use make it a…
Comment: DESeq2 for candidate gene analysis
by
piffelpaff
▴
10
thank you so much for answering Dr. Love!
Answer: DESeq2 for candidate gene analysis
by
Michael Love
43k
Your plan 1 is reasonable. Run DESeq2 on the whole dataset to obtain size factors and moderated dispersion estimates and then extract the u…
Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in
by
James W. MacDonald
68k
Oh.
```
> z <- read10xCounts(c(tmpdir, tmpdir), mtx.class = "SVT_SparseMatrix", delayed = TRUE)
> class(counts(z))
[1] "DelayedMatrix"
att…
Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in
by
James W. MacDonald
68k
That's weird. Using the example data works for me.
```
> example(read10xCounts)
rd10xC> # Mocking up some 10X genomics output.
rd10xC> ex…
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