Showing : widgettools • reset
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Error loading tcltk for tkWidgets and widgetTools on duo Intel Mac under OS X
Cancer tkWidgets widgetTools Cancer tkWidgets widgetTools
updated 17.6 years ago by ▴ 150 • written 17.6 years ago by ★ 2.9k
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1.1k
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marray and limma error with lmFit
Microarray Biobase DynDoc widgetTools limma arrayQuality marray convert Microarray DynDoc
17.0 years ago Paquet, Agnes ▴ 500
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4
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1.2k
views
Enabling the widget option
tkWidgets affy widgetTools tkWidgets affy widgetTools
21.3 years ago Tapan Mehta ▴ 270
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1
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845
views
Installation failed
reposTools widgetTools reposTools widgetTools
updated 21.2 years ago by ★ 3.9k • written 21.2 years ago by ▴ 30
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8
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2.0k
views
widgetTools
affy widgetTools affy widgetTools
updated 21.2 years ago by ▴ 40 • written 21.2 years ago by ▴ 90
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2
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957
views
Problems Getting Started
cdf widgetTools cdf widgetTools
updated 21.1 years ago by ★ 1.1k • written 21.1 years ago by ▴ 340
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693
views
Error in loading bioconductor packages in Rterm and ESS+XEmacs modes
GUI widgetTools GUI widgetTools
21.0 years ago Dr Mushtaq Ahmed ▴ 20
0
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1
reply
864
views
ReadAffy error
widgetTools widgetTools
updated 20.8 years ago by ★ 2.3k • written 20.8 years ago by ★ 1.4k
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832
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update.packages
widgetTools widgetTools
20.8 years ago Justin Borevitz ▴ 90
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3
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1.2k
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Recent changes to Bioconductor packages
reposTools graph widgetTools limma reposTools graph widgetTools limma
20.6 years ago • updated 20.5 years ago madman@jimmy.harvard.edu ▴ 850
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Re: Annotate clones Bioconductor beginner
Microarray Annotation GUI annotate widgetTools AnnBuilder Microarray Annotation GUI
20.4 years ago John Zhang ★ 2.9k
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0
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1.1k
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Tcl install
genefilter widgetTools genefilter widgetTools
19.5 years ago Matt McCall ▴ 50
0
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0
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1.0k
views
batch vs interactive behavior of reposTools()
Biobase DynDoc tkWidgets widgetTools Biobase DynDoc tkWidgets widgetTools
19.4 years ago Marion Hakanson ▴ 50
0
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2
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3.3k
views
Can't install tcl/tk on Mac OS 10.3.7
widgetTools widgetTools
updated 19.3 years ago by ▴ 430 • written 19.3 years ago by ▴ 10
0
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9
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1.9k
views
Getting LimmaGUI to run
tkWidgets widgetTools limmaGUI widgetInvoke tkWidgets widgetTools limmaGUI widgetInvoke
18.8 years ago chris umbricht ▴ 110
0
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1
reply
908
views
ReadAffy question
GO Ruuid DynDoc annotate genefilter multtest tkWidgets reposTools affy widgetTools limma
updated 18.3 years ago by 65k • written 18.3 years ago by ▴ 890
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3
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1.3k
views
widgetTools wFuns problem
DynDoc tkWidgets reposTools widgetTools DynDoc tkWidgets reposTools widgetTools
updated 18.2 years ago by ★ 2.9k • written 18.2 years ago by ▴ 80
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1
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721
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error running the example of the widget function in the widgetTools library
widgetTools widgetTools
updated 18.0 years ago by ★ 7.4k • written 18.0 years ago by ▴ 80
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0
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809
views
error running the example of the widget function in the widgetTools library
widgetTools widgetTools
18.0 years ago Hervé Pagès 16k
0
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0
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773
views
Error loading tcltk for tkWidgets and widgetTools on duo Intel Mac under OS X
widgetTools widgetTools
17.6 years ago John E. Cornell, Ph.D. ▴ 150
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0
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958
views
problems reading Illumina files using BeadExplorer
affy widgetTools limma marray convert affyio BeadExplorer affy widgetTools limma marray
17.5 years ago Vitalina Komashko ▴ 10
0
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12
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1.9k
views
Some Genefilter questions
GO Survival cdf genefilter geneplotter tkWidgets affy affydata widgetTools gcrma affyPLM
updated 17.4 years ago by ★ 5.5k • written 17.4 years ago by ▴ 460
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10
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1.9k
views
Some Genefilter questions
Normalization Survival Cancer cdf genefilter geneplotter affy affydata widgetTools gcrma
updated 17.4 years ago by ▴ 460 • written 17.4 years ago by ▴ 70
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0
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955
views
Memory issues with limma and ImaGen file import
widgetTools limma widgetTools limma
17.3 years ago CV Markus ▴ 10
0
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1
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1.1k
views
paired design, LIMMA
cdf tkWidgets affy widgetTools limma affyio cdf tkWidgets affy widgetTools limma affyio
updated 17.0 years ago by ▴ 470 • written 17.0 years ago by 50k
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6
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1.3k
views
install Monograph problem
Cancer widgetTools Cancer widgetTools
17.0 years ago Seth Falcon ★ 7.4k
0
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1
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1.2k
views
tcl/tk and biocLite
Genetics Cancer tkWidgets widgetTools marray Genetics Cancer tkWidgets widgetTools marray
updated 17.0 years ago by ★ 7.4k • written 17.0 years ago by ▴ 30
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0
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903
views
tcl/tk dependency of biocLite
Genetics Cancer tkWidgets widgetTools marray Genetics Cancer tkWidgets widgetTools marray
17.0 years ago grischa tödt ▴ 30
0
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0
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999
views
Bioconductor web page
GO Cancer tkWidgets reposTools widgetTools simpleaffy affyQCReport affyio GO Cancer
16.9 years ago Seth Falcon ★ 7.4k
0
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2
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1.3k
views
ReadAffy widget fails for Annotated DataFrame
Microarray DynDoc tkWidgets affy widgetTools Microarray DynDoc tkWidgets affy widgetTools
updated 16.6 years ago by 25k • written 16.6 years ago by ▴ 140
30 results • Page 1 of 1
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Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length by ussarizona ▴ 10
Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…
Answer: Deseq2. decontXcounts not integers. Useful alternative? by Michael Love 41k
Another option would be to put the per sample estimated contamination in the design. This is for example how RUV etc help remove spurious D…
Answer: ATACseq merge peaks by ATpoint ★ 4.0k
That depends on your analysis. Typically, for differential analysis (and convenience) you would produce a single set of peaks (e.g. by merg…
Comment: Deseq2. decontXcounts not integers. Useful alternative? by camp ▴ 10
Yes, @atpoint is correct. decontX decontaminated counts are not integers due to the way the variation inference algorithm works, but you ca…
Comment: Deseq2. decontXcounts not integers. Useful alternative? by ATpoint ★ 4.0k
I do not know this decontamination tool you use but generally: If these counts are basically "corrected" raw counts in the sense that they'…
Votes
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
Comment: Deseq2. decontXcounts not integers. Useful alternative?
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
biomaRt error: database disk image is malformed
Comment: biomaRt : No lock file for BiocFileCache
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