Bioconductor Zinbwave

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766

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zinbwave DESeq2

written 7 weeks ago by Aurélie • 0

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2.0k

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edgeR DESeq2 single-cell scRNAseq zinbwave

updated 4.4 years ago by Aaron Lun ★ 29k • written 4.4 years ago by vincent.croset ▴ 20

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2.5k

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DESeq2 ZINB zinbwave deseq

updated 4.6 years ago by Michael Love 43k • written 4.6 years ago by rowcyclecamp • 0

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988

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zinbwave PCA

4.9 years ago Assa Yeroslaviz ★ 1.5k

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2.8k

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scRNA zinbwave batch IntegratedData

updated 5.0 years ago by davide risso ▴ 980 • written 5.0 years ago by Assa Yeroslaviz ★ 1.5k

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2.1k

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deseq2 zinbwave 10X scRNA-seq Differential expression

updated 5.2 years ago by Michael Love 43k • written 5.2 years ago by vincent.croset ▴ 20

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3.8k

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cmdscale zinbwave scRNA-seq single cell sequencing RNA-seq

updated 5.2 years ago by davide risso ▴ 980 • written 5.3 years ago by Wagaa ▴ 10

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2.9k

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zinbwave deseq2 vegan

updated 5.8 years ago by James W. MacDonald 68k • written 5.8 years ago by zcbthug • 0

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1.5k

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deseq2 glm zinbwave ruvseq

updated 6.7 years ago by Michael Love 43k • written 6.7 years ago by Jakub ▴ 50

9 results • Page 1 of 1

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Comment: Visualization of Functional Enrichment Result with enrichplot: How to control la by zhaoqiansun0592 • 0

Wow, this is super helpful! I always struggle with label sizes in enrichplot. Glad to see a solution using gginnards([Pasjans][1]) and ggre…

Comment: Could we detect difference at pathway level but not significant different at gen by zhaoqiansun0592 • 0

Interesting question! It's cool that ChatGPT4 gave such a helpful answer. I've also been wondering if pathways([space waves][1]) can show d…

Comment: Perform gene set enrichment analysis using fgsea on two conditions that don't ha by zhaoqiansun0592 • 0

Good to know there are workarounds for these tricky [doodle baseball][1]! Thanks for sharing the tips! [1]: https://doodle-baseball.cc/

Comment: GO.db and others package Download failure by James W. MacDonald 68k

Also, you never need to use anything but `BiocManager::install` to install any package, which has the beneficial side effect of ensuring th…

Comment: GO.db and others package Download failure by James W. MacDonald 68k

Yes. Your packages have odd Y version numbers (where the version is X.Y.Z). That means they are devel packages (release versions have even …