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Creation
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Rank
Views
Votes
0
votes
0
replies
908
views
RMA algorithm
Normalization
Normalization
22.8 years ago
Shinichiro Wachi
▴ 50
0
votes
0
replies
884
views
[BioCTrain] announcement: training option Boston May 2003
Preprocessing
Infrastructure
oligo
Preprocessing
Infrastructure
oligo
22.8 years ago
Vincent Carey
▴ 10
0
votes
5
replies
1.8k
views
the result of bioconductor not agree with MAS
DOSE
DOSE
updated 22.8 years ago by
"Hüsing, Johannes"
▴ 60 • written 22.9 years ago by
Lang Chen
▴ 100
0
votes
1
reply
698
views
help
updated 22.8 years ago by
Rafael A. Irizarry
★ 2.3k • written 22.8 years ago by
Gene Array Resource Center
▴ 10
0
votes
3
replies
1.3k
views
bioconductor help
updated 22.8 years ago by
Vincent J. Carey, Jr.
6.7k • written 22.8 years ago by
cxd55@cwru.edu
▴ 20
0
votes
1
reply
1.1k
views
Affy RNA digestion plots (fwd)
affy
affy
updated 22.8 years ago by
Hinnerk Boriss
▴ 220 • written 22.8 years ago by
Leslie Cope
▴ 50
0
votes
3
replies
5.3k
views
How to use Rcmd
updated 22.8 years ago by
A.J. Rossini
▴ 810 • written 22.8 years ago by
Zhao, Po
▴ 90
0
votes
0
replies
864
views
Win32 packages
22.8 years ago
Jeff Gentry
★ 3.9k
0
votes
1
reply
643
views
One-channel cDNA data
updated 22.8 years ago by
Wolfgang Huber
★ 13k • written 22.8 years ago by
DED David George Edwards
▴ 10
0
votes
0
replies
874
views
less memory usage
affy
affy
22.8 years ago
Rafael A. Irizarry
★ 2.3k
0
votes
0
replies
717
views
Affy RNA digestion plots
affy
affy
22.8 years ago
Matt Wayland
▴ 10
0
votes
1
reply
1.2k
views
getBioC problem: reposTools
Genetics
reposTools
Genetics
reposTools
updated 22.8 years ago by
Jeff Gentry
★ 3.9k • written 22.8 years ago by
James Wettenhall
▴ 1000
0
votes
1
reply
884
views
mixing hg_u95a and hg_u95av2 chips
hgu95a
probe
hgu95a
probe
updated 22.9 years ago by
Wolfgang Huber
★ 13k • written 22.9 years ago by
Hinnerk Boriss
▴ 220
0
votes
8
replies
2.8k
views
widgetTools
affy
widgetTools
affy
widgetTools
updated 22.9 years ago by
Kristina Hanspers
▴ 40 • written 22.9 years ago by
Zhao, Po
▴ 90
0
votes
0
replies
847
views
getBioC on alpha
22.9 years ago
Claudio Lottaz
▴ 110
0
votes
2
replies
1.1k
views
Help with genbank
updated 22.9 years ago by
Jeff Gentry
★ 3.9k • written 22.9 years ago by
Jean Yee Hwa Yang
▴ 920
0
votes
2
replies
1.2k
views
affy still not working
GUI
affy
GUI
affy
updated 22.9 years ago by
Jeff Gentry
★ 3.9k • written 22.9 years ago by
mary.e.logue@ucd.ie
▴ 20
0
votes
2
replies
922
views
three more questions
updated 22.9 years ago by
Warnes, Gregory R
▴ 460 • written 22.9 years ago by
Zhao, Po
▴ 90
0
votes
1
reply
872
views
installation of cdf package
cdf
probe
cdf
probe
updated 22.9 years ago by
Rafael A. Irizarry
★ 2.3k • written 22.9 years ago by
Zhang, Hongen NIH/NCI
▴ 30
0
votes
1
reply
1.1k
views
Installation failed
reposTools
widgetTools
reposTools
widgetTools
updated 22.9 years ago by
Jeff Gentry
★ 3.9k • written 22.9 years ago by
Zhang, Hongen NIH/NCI
▴ 30
0
votes
2
replies
1.6k
views
Problems encountered using affy in R
Biobase
annotate
genefilter
multtest
ROC
tkWidgets
affy
vsn
Biobase
annotate
genefilter
updated 22.9 years ago by
Vincent J. Carey, Jr.
6.7k • written 22.9 years ago by
mary.e.logue@ucd.ie
▴ 20
0
votes
2
replies
950
views
quick question
updated 22.9 years ago by
Jeff Gentry
★ 3.9k • written 22.9 years ago by
Zhao, Po
▴ 90
0
votes
0
replies
923
views
Chip Analysis Assistance
probe
probe
22.9 years ago
Luckey, John
▴ 90
0
votes
1
reply
1.1k
views
memory problem with Affy
affy
PROcess
affy
PROcess
updated 22.9 years ago by
Jeff Gentry
★ 3.9k • written 22.9 years ago by
Phguardiol@aol.com
▴ 720
0
votes
0
replies
839
views
Re: memory problem with Affy
tkWidgets
tkWidgets
22.9 years ago
Sylvia Merk
▴ 50
0
votes
1
reply
1.5k
views
Trouble in making the cdf package for Arabidopsis?
cdf
probe
makecdfenv
cdf
probe
makecdfenv
updated 22.9 years ago by
Rafael A. Irizarry
▴ 640 • written 22.9 years ago by
Hua Liu
▴ 20
0
votes
1
reply
1.2k
views
Re: Try to run a lots of chips: 32 bits vs 64 bits
Normalization
GO
Network
Normalization
GO
Network
updated 22.9 years ago by
Anthony Rossini
▴ 530 • written 22.9 years ago by
Nicholas Lewin-Koh
▴ 430
0
votes
4
replies
1.3k
views
(no subject)
annotate
reposTools
annotate
reposTools
updated 22.9 years ago by
Jeff Gentry
★ 3.9k • written 22.9 years ago by
Tiago R Magalhaes
▴ 60
0
votes
7
replies
1.9k
views
Try to run a lots of chips: 32 bits vs 64 bits
Normalization
PROcess
Normalization
PROcess
updated 22.9 years ago by
rgentleman
★ 5.5k • written 22.9 years ago by
Shi, Tao
▴ 720
0
votes
3
replies
1.3k
views
Question regarding the R data package.....???
annotate
AnnBuilder
annotate
AnnBuilder
updated 22.9 years ago by
John Zhang
★ 2.9k • written 22.9 years ago by
arun kumar vinnakota
▴ 30
0
votes
1
reply
1.3k
views
normalization question
Normalization
Normalization
updated 22.9 years ago by
Rafael A. Irizarry
▴ 640 • written 22.9 years ago by
Phguardiol@aol.com
▴ 720
0
votes
1
reply
1.2k
views
Bioconductor cdf package for Arabidopsis?
cdf
probe
cdf
probe
updated 22.9 years ago by
Rafael A. Irizarry
▴ 640 • written 22.9 years ago by
Hua Liu
▴ 20
0
votes
0
replies
1.2k
views
e coli CDF file?
cdf
cdf
22.9 years ago
Byron Ellis
▴ 280
0
votes
0
replies
1.1k
views
x,y-probe locations and the AffyBatch
mgu74a
cdf
probe
affy
mgu74a
cdf
probe
affy
22.9 years ago
Laurent Gautier
★ 2.3k
0
votes
0
replies
1.2k
views
x,y-probe locations and the AffyBatch
mgu74a
probe
affy
mgu74a
probe
affy
22.9 years ago
Wolfgang Huber
★ 13k
0
votes
0
replies
705
views
Affymetrix background correction
22.9 years ago
Helene Boucher
▴ 20
0
votes
2
replies
1.1k
views
Out of memory during ReadAffy
GO
GO
updated 22.9 years ago by
Isaac Neuhaus
▴ 360 • written 22.9 years ago by
laurent buffat
▴ 190
0
votes
0
replies
776
views
C. elegans cdf package
Microarray
cdf
affy
Microarray
cdf
affy
22.9 years ago
James W. MacDonald
68k
0
votes
1
reply
921
views
cdf installation
cdf
affy
cdf
affy
updated 22.9 years ago by
Wolfgang Huber
★ 13k • written 22.9 years ago by
Zhao, Po
▴ 90
0
votes
0
replies
721
views
Affymetrix CDF Packages
cdf
cdf
22.9 years ago
Thomas Girke
▴ 10
0
votes
0
replies
711
views
Transcription factors and gene networks
22.9 years ago
Jeff Sorenson
▴ 70
0
votes
0
replies
921
views
nano/bio convergence
22.9 years ago
Nano2bio@aol.com
▴ 10
0
votes
0
replies
944
views
Re: makecdfenv
makecdfenv
makecdfenv
22.9 years ago
Rafael A. Irizarry
▴ 640
0
votes
1
reply
1.0k
views
how to get a cdf envirment file
cdf
cdf
updated 22.9 years ago by
Rafael A. Irizarry
▴ 640 • written 22.9 years ago by
Huang, Cheng-Cheng NIH/NCI
▴ 30
0
votes
1
reply
788
views
read.Genepix
updated 22.9 years ago by
Jean Yee Hwa Yang
▴ 920 • written 22.9 years ago by
Susan Slifer
▴ 10
0
votes
2
replies
1.2k
views
problems attaching affy library
affy
affy
updated 22.9 years ago by
Rafael A. Irizarry
▴ 640 • written 22.9 years ago by
Mahlet Tadesse
▴ 20
0
votes
4
replies
2.0k
views
heatmap
updated 22.9 years ago by
Adaikalavan Ramasamy
▴ 140 • written 22.9 years ago by
Liaw, Andy
▴ 360
0
votes
5
replies
1.6k
views
Recent changes to Bioconductor packages
SAGE
annotate
geneplotter
graph
SAGElyzer
Rdbi
SAGE
annotate
geneplotter
graph
SAGElyzer
22.9 years ago
madman@jimmy.harvard.edu
▴ 850
0
votes
1
reply
1.0k
views
Members Only field removed
updated 22.9 years ago by
"Hüsing, Johannes"
▴ 60 • written 22.9 years ago by
Jeff Gentry
★ 3.9k
0
votes
0
replies
487
views
test
22.9 years ago
Jeff Gentry
▴ 10
46,710 results • Page
927 of 935
Recent ...
Replies
Comment: Guitar R package requires update due to dependency GenomicFeatures
by
ferran.llobet.cabau
▴ 10
Thank you @seandavi for your feedback. I followed your recommendations and generated a [pull request][1] including the fix for this issue…
Comment: Ensembl plants at annotationHub?
by
Guido Hooiveld
★ 4.1k
Hope you don't mind I am not Johannes... ;-) Note that you nowadays can generate these yourselves using the `docker` image Johannes made av…
Comment: How does contrasts.fit do in limma to extract comparisons with a model having in
by
jtsy6383
• 0
Thanks for the reminder about DiffVar (for that project I ended up using GAMLSS in the end and haven't touched DiffVar since) and the alter…
Comment: Ensembl plants at annotationHub?
by
jwp48
• 0
Dear Johannes, Would it be possible to generate a EnsDb for the newest Medicago V5 genome release? Medicago truncatula A17 r5.0 This woul…
Answer: please provide a BibTeX citation for "Advanced Single-Cell Analysis with Biocond
by
Ludwig Geistlinger
▴ 80
When referring to the OSCA book including individual sub-books please cite the OSCA paper: Amezquita, R.A., Lun, A.T.L., Becht, E. et a…
Votes
limma moderated t-statistics and B-statistics
Comment: Guitar R package requires update due to dependency GenomicFeatures
A: how to control age and gender effect in expression data using DESeq2
A: how to control age and gender effect in expression data using DESeq2
how to control age and gender effect in expression data using DESeq2
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