Prophet

Created A Post With More Than 20 Followers

Awarded 133 times (see all awards). Earned by the following contributors:
Leonardo Collado Torres ★ 1.0k
6 days, 16 hours ago
United States
[Pre-print] Transcriptome-scale spatial gene expression in the human dorsolateral prefrontal cortex
shepherl 3.8k
8 months, 3 weeks ago
United States
Final List of Deprecated Packages for Bioc3.7
A ▴ 40
8 months, 3 weeks ago
United Kingdom
Can DEXSeq ouput be used directly as an input for IsoformSwitchAnalyzeR
shepherl 3.8k
11 months, 2 weeks ago
United States
Final List of Deprecated Package Bioc 3.9
amnahsiddiqa ▴ 10
1 year ago
United States
WGCNA grey module
linouhao ▴ 20
1 year ago
United States
can negative value microarray matrix data analysed by limma directly
samwhite ▴ 20
1 year, 1 month ago
United States
GSEABase - Map gene/transcript IDs to GOslims?
ibrahim.akkouh • 0
1 year, 2 months ago
Norway
Nested paired design with covariates in limma
ramonmassoni ▴ 10
1 year, 2 months ago
Spain
How to work with dplyr verbs in the colData slot of SingleCellExperiment objects?
Jenny Drnevich ★ 2.0k
1 year, 9 months ago
United States
How to manage AnnotationHub snapshots / most OrgDB are missing?
ag1805x ▴ 80
1 year, 11 months ago
University of Allahabad
Calculation of module membership in WGCNA
Beginner ▴ 60
1 year, 11 months ago
Switzerland
Possible ways to select differential expressed genes using DeSeq2 or edgeR
metamaden ▴ 10
1 year, 11 months ago
United States
Illumina 450k Manifest: Probes Mapping to Multiple RefGene Groups and Names
Kevin Blighe ★ 3.9k
1 year, 12 months ago
Republic of Ireland
ggbio - change transcript label sizes
igor ▴ 40
2 years ago
United States
DESeq2 counts distribution across both genes and samples
kushshah ▴ 10
2 years ago
University of North Carolina, Chapel Hi…
ERROR - Size factors should be positive real numbers (using normalize() function)
Michael Love 41k
2 years ago
United States
IRanges vignette code comment
rodrigo.duarte88 ▴ 30
2 years, 1 month ago
United States
Using PEER to identify hidden confounders in RNA-seq data (not working)
santamariagianluca • 0
2 years, 1 month ago
Italy
Deseq2 normalization steps
johnmcma ▴ 10
2 years, 1 month ago
United States
Limma: difference between groups of paired data
bony.dekumar • 0
2 years, 2 months ago
United States
How to get all possible comparisons in DiffBind
andreia ▴ 10
2 years, 3 months ago
Portugal
deseq2 + filtering low counts with noiseq function
k.vitting.seerup ▴ 120
2 years, 4 months ago
European Union
Comparing discrete variable to PCA
Harpreet Kaur • 0
2 years, 4 months ago
United States
Errors in Processing GSE36411_non-normalized.txt file of Illumina data using lumi Package and limma package
agustin.gonvi ▴ 20
2 years, 4 months ago
Cleveland, OH
tximport from Galaxy output
array chip ▴ 420
2 years, 5 months ago
United States
DESeq2 vs TCGAbiolinks normalization methods
Jeni ▴ 10
2 years, 5 months ago
Spain
DMRcate Error in if (nsig == 0) { : missing value where TRUE/FALSE needed
Jitendra ▴ 10
2 years, 5 months ago
United Kingdom
How to add pseudocount to DESeq2 dds object
mzwanelen ▴ 10
2 years, 6 months ago
Canada
rtracklayer: error in importing bigwig file in r in windows
prodhan82 ▴ 20
2 years, 6 months ago
Australia
Is there any R package for filtering out SNP markers?
lshepard ▴ 40
2 years, 6 months ago
United States
Extracting normalized counts in MEDIPS
efernandez • 0
2 years, 7 months ago
Argentina
"ERROR: cannot create temp file" when using buildindex from Rsubread
changxu.fan ▴ 20
2 years, 7 months ago
United States
How does the design formula affect dispersion estimate in DESeq2?
gv ▴ 40
2 years, 8 months ago
United States
extract TCGA barcodes and sample_type information from uuids
andreia ▴ 10
2 years, 8 months ago
Portugal
create S-plots with ropls package
morteza.hadizade ▴ 10
2 years, 8 months ago
Iran
Remove NaN from a list or replace NaN with a value.
Matthew Ritchie ▴ 1000
2 years, 8 months ago
Australia
BioCAsia Virtual Meeting, 15-18 October 2020
Colari19 ▴ 60
2 years, 8 months ago
United Kingdom
WGCNA coupled with differential expression analysis: question about baseline module detection
shepherl 3.8k
2 years, 9 months ago
United States
New Package Submission Workflow Updates!
stewart999 ▴ 10
2 years, 9 months ago
United Kingdom
missMethyl - get names of differentially methylated genes from gometh()
ta_awwad ▴ 10
2 years, 9 months ago
Frankfurt am Main
Basic4Cseq wiggle function
Martin Morgan 25k
2 years, 9 months ago
United States
Bioconductor Technical Advisory Board Nominees, 2020
Michael Love 41k
2 years, 10 months ago
United States
IHW and correlated covariates
Christian Mertes • 0
2 years, 10 months ago
Germany
Rsubread requests longread mode for shotgun RNAseq data
cagenet34 ▴ 20
2 years, 10 months ago
Toulouse, France, INRA
makeOrgPackageFromNCBI for non model species -> eror in file
bertb • 0
2 years, 11 months ago
Canada
Unable to annotate in ChIPQC using yeast genome
researcher • 0
2 years, 12 months ago
United States
minfi error in read.metharray
Giovanni Calice ▴ 160
2 years, 12 months ago
Italy
clusterProfiler merge_result dotplot
DannyM • 0
3 years ago
Germany
DepMap copy number
cja • 0
3 years ago
United States
deseq2 - paired samples in 2 sequencing types with very different library sizes
133 results • Page 1 of 3
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