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May 31st is the last day to nominate for Bioc2023 Awards!
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12 months ago
shepherl
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BioC2023 abstract submission is now open!
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written 15 months ago by
Maria Doyle
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Join the Community Advisory Board -- upcoming elections -- deadline Today
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written 17 months ago by
shepherl
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Win 1 of 50 free virtual registrations to BioC Asia 2022 (Dec 1-2, 2022)
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written 18 months ago by
Peter Hickey
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Nominations for Bioconductor 2022 Awards!
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written 2.2 years ago by
shepherl
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[Pre-print] Transcriptome-scale spatial gene expression in the human dorsolateral prefrontal cortex
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written 4.2 years ago by
Leonardo Collado Torres
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Bioinformatics Summer School - July 2019 - UCLouvain (Belgium)
RNAseq
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written 5.3 years ago by
Laurent Gatto
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Final List of Deprecated Packages for Bioc3.7
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written 6.2 years ago by
shepherl
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Comment: Why is longestConsecutive() depreceated in version 2.72 (BioC version 3.19)?
by
ATpoint
★ 4.2k
I don't have an answer to the "why" but maybe a simple reimplemention will do: ```r seqs <- c("ATCATCGTATCAAAGTC", "AAAACGTATCAAAGTC", "TG…
Comment: How to add Ensembl ids after Pseudobulk analysis by DESeq2
by
Guido Hooiveld
★ 4.0k
After checking `?DESeqDataSetFromMatrix` note this information: arguments provided to SummarizedExperiment including rowRanges and met…
Answer: Error in gseDO function
by
Guido Hooiveld
★ 4.0k
Yes, you are missing something. :-) For a GSEA you will need to use as input all genes that you are analyzing; these genes should be ran…
Comment: GSVA function
by
Robert Castelo
★ 3.3k
No, negative values may occur after log transformation when the `log(x)` is taken from a positive number `x with 0 < x < 1`, and therefore …
Comment: conumee with Infinium MethylationEPIC v2.0
by
sgomez
• 0
Hi Max, Could you try this? https://support.bioconductor.org/p/9136138/#9136840
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A: Comparison between two different group's pathway analysis results
DiffBind Batch Effect
A: DiffBind Batch Effect
A: DiffBind Batch Effect
C: DiffBind Batch Effect
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