6 months ago • updated 12 days ago
shepherl
3.9k
6
votes
12
replies
4.9k
views
7
votes
36
replies
5.6k
views
updated 4 weeks ago by
Shiva
•
0
•
written 5.5 years ago by
Guido Hooiveld
★
3.9k
0
votes
6
replies
334
views
updated 24 days ago by
Tim Peters
▴
180
•
written 4 weeks ago by
s.malik
•
0
2
votes
1
reply
333
views
updated 9 weeks ago by
Michael Love
41k
•
written 9 weeks ago by
Filipe
•
0
0
votes
0
replies
168
views
3 months ago
hayleyw
•
0
2
votes
28
replies
4.4k
views
updated 5 months ago by
James W. MacDonald
65k
•
written 17 months ago by
Manmohit
▴
10
3
votes
4
replies
1.2k
views
updated 6 months ago by
Guido Hooiveld
★
3.9k
•
written 6 months ago by
BS
•
0
1
vote
2
replies
573
views
9
votes
11
replies
5.8k
views
updated 7 weeks ago by
shepherl
3.9k
•
written 2.3 years ago by
jon.klonowski
▴
40
3
votes
11
replies
5.0k
views
updated 12 weeks ago by
Guido Hooiveld
★
3.9k
•
written 3.3 years ago by
Alberto
•
0
Recent ...
Replies
Answer: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
•
0
Hi Michael,
I think there is something wrong with the generation of nullranges. I was working with small RNA and methylation overlaps. …
Answer: Once again a "Model matrix not full rank"
by
swbarnes2
★
1.3k
Replicate numbers, like the 1 in control_1 are fine in sample names, but never add them to anything else in colData. From the computer's p…
Answer: limma Intercept vs No-intercept models completely changing DMR results?
by
Gordon Smyth
50k
I'll add a little bit of general advice to James' answer. You seem to have the misunderstanding that you can change the design matrix but …
Answer: package goseq seems to be not available on the latest version of R
by
Gordon Smyth
50k
It is true that goseq isn't available for Bioc 3.19 (as at 4 May 2024).
In the meantime, you could consider using the goana() and kegga() …
Answer: limma Intercept vs No-intercept models completely changing DMR results?
by
James W. MacDonald
65k
This part:
```
design_intercept <- model.matrix(~Alt+Sex+Age+PC1, data=targets_Sherpa)
colnames(design_intercept) <- c("AltSHP_LA","Al…
Votes
Awards
• All
Popular Question to
Gordon Smyth
50k
Popular Question to
Zainab
•
0
Popular Question to
Theo
▴
10
Popular Question to
gene_bioconductor
▴
10
Popular Question to
rohitsatyam102
▴
20
Locations
• All
United States, 2 minutes ago
France, 10 minutes ago
WEHI, Melbourne, Australia, 24 minutes ago
Australia, 29 minutes ago
United States, 41 minutes ago
United States, 2 minutes ago
France, 10 minutes ago
WEHI, Melbourne, Australia, 24 minutes ago
Australia, 29 minutes ago
United States, 41 minutes ago
Traffic: 659 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6