Showing : BiocVersion • reset
6
votes
9
replies
2.3k
views
Install Bioconductor 3.7
docker BiocManager BiocVersion
updated 5.0 years ago by 25k • written 5.0 years ago by ▴ 90
4
votes
1
reply
2.2k
views
News: Join the Bioconductor Community Advisory Board
bioconductoroversight community BiocVersion news
updated 3.2 years ago by • 0 • written 3.2 years ago by ▴ 1000
2
votes
0
replies
873
views
News: New Bioconductor Community Advisory Board Members for 2021
bioconductoroversight news community BiocVersion
3.1 years ago Matthew Ritchie ▴ 1000
1
vote
1
reply
4.9k
views
package ‘destiny’ is not available for Bioconductor version '3.13'
destiny BiocVersion
updated 2.8 years ago by 3.8k • written 2.8 years ago by ▴ 10
1
vote
3
replies
926
views
Why is Bioconductor telling me to add an unreleased dependency of R 4.1 in my package ?
versions BiocVersion dependencies
updated 3.1 years ago by 3.8k • written 3.1 years ago by • 0
1
vote
9
replies
1.5k
views
Why is OrgDb linked to specific biocversion? / How to analyze old datasets?
BiocVersion OrgDb clusterProfiler
18 months ago • updated 17 months ago MK • 0
1
vote
1
reply
548
views
Deploying to shinyapps.io returns error for BiocVersion and phangorn packages
BiocVersion phangorn ShinyApps
updated 5 months ago by 65k • written 5 months ago by • 0
0
votes
2
replies
288
views
Can't download Bioconductor
BiocVersion
updated 4 months ago by ★ 4.0k • written 4 months ago by • 0
0
votes
5
replies
1.2k
views
Trouble with DESeqDataSetFromMatrix
BiocVersion
updated 2.7 years ago by 3.8k • written 2.7 years ago by • 0
0
votes
2
replies
460
views
can't update bioconductor 3.18
BioCor bioc BiocVersion
6 months ago feifan • 0
0
votes
2
replies
1.2k
views
Install older version of DESeq2 for use on cluster with older version of R
DESeq2 BiocVersion
updated 2.8 years ago by • 0 • written 2.8 years ago by • 0
0
votes
0
replies
756
views
Job: Job: Product-focused Bioinformatician
massgeek Reactome Proteomics STRINGdb
3.4 years ago paula • 0
12 results • Page 1 of 1
Recent ...
Replies
Answer: PCA plot suggestions by Michael Love 41k
For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length by ussarizona ▴ 10
Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…
Answer: Deseq2. decontXcounts not integers. Useful alternative? by Michael Love 41k
Another option would be to put the per sample estimated contamination in the design. This is for example how RUV etc help remove spurious D…
Answer: ATACseq merge peaks by ATpoint ★ 4.0k
That depends on your analysis. Typically, for differential analysis (and convenience) you would produce a single set of peaks (e.g. by merg…
Comment: Deseq2. decontXcounts not integers. Useful alternative? by camp ▴ 10
Yes, @atpoint is correct. decontX decontaminated counts are not integers due to the way the variation inference algorithm works, but you ca…
Votes
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
Comment: Deseq2. decontXcounts not integers. Useful alternative?
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
biomaRt error: database disk image is malformed
Comment: biomaRt : No lock file for BiocFileCache
Awards • All
Popular Question to shepherl 3.8k
Popular Question to James W. MacDonald 65k
Scholar to Michael Love 41k
Supporter to JKim • 0
Popular Question to Gordon Smyth 50k
Locations • All
France, 13 minutes ago
United States, 26 minutes ago
Ireland, 26 minutes ago
San Diego, 27 minutes ago
EMBL Heidelberg, 38 minutes ago
Traffic: 990 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6