Bioconductor CyToF

Showing : CyToF • reset

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1.1k

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cytofWorkflow cytof diffcyt

5.0 years ago achaillon • 0

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1.9k

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Cytofast FlowSom CyTOF fcs files

5.2 years ago domenico.somma • 0

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1.6k

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deseq2 mass cytometry CyTOF

updated 5.2 years ago by Michael Love 43k • written 5.2 years ago by mikhael.manurung ▴ 280

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989

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batch effect cytof

5.8 years ago mikhael.manurung ▴ 280

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2.5k

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Cydar CyTOF normalization

updated 6.3 years ago by Aaron Lun ★ 29k • written 6.3 years ago by ghogg • 0

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1.5k

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cydar CyTOF

updated 6.8 years ago by Aaron Lun ★ 29k • written 6.8 years ago by mikhael.manurung ▴ 280

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1.8k

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cytofkit cytof write.csv output

updated 9.1 years ago by chen_hao ▴ 30 • written 9.1 years ago by cjackson13 • 0

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3.2k

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flowCore flowcore CyToF Rtsne

updated 10.4 years ago by Jiang, Mike ★ 1.3k • written 10.4 years ago by clevy ▴ 10

8 results • Page 1 of 1

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Answer: wgcna module preseravtion taking too long? by ATpoint ★ 5.0k

WGCNA is not a Bioconductor package, you won't get an answer here. Consider biostars.org or the r/bioinformatics reddit. Note that 10 sampl…

Answer: Question about RE-agnostic mode for intact Hi-C and Micro-C normalization(HiCDCP by victor04052024 • 0

You write quite well, and the content is very interesting. I'll provide you a link to my page [granny 2](https://granny2.io).

Answer: DESeq2 - how many surrogate variables from svaseq, use of lfcshrink by victor04052024 • 0

The information is interesting, and your writing is excellent. I will provide you a link to my website [Baseball bros](https://baseball-gam…

Comment: segfault in edgeR glmQLFit by Gordon Smyth 53k

We have committed a bug fix now to edgeR on both the release and developmental Bioconductor repositories.

Answer: Ensembl site unresponsive via biomaRt by horaortiz8 • 0

I appreciate the link. I'll get in touch with them directly; I wish they had a status page of some kind. https://www.ensembl.org/Help/Cont…

Votes

Limma-voom sample weights and impact on DEG numbers

C: DESeq2 Following RSEM

Upcoming Ensembl API and data access changes - new blog post available

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Answer: Large logFC but somewhat high FDR

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