Showing : EmptyDrops • reset
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emptyDrops new default alpha = Inf giving far fewer non-empty droplets than under old default of alpha = NULL
scrn 10x scRNAseq emptyDrops DropletUtils
3 months ago • updated 12 weeks ago Peter Hickey ▴ 760
0
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2
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1.0k
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Non-empty droplets versus good quality cells
CellRanger emptyDrops scRNAseq 10X
20 months ago • updated 19 months ago rocanja ▴ 60
0
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1
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1.5k
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Choosing the right lower limit for emptyDrops
SingleCell emptyDrops 10X
updated 2.5 years ago by ▴ 760 • written 2.5 years ago by • 0
4
votes
5
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4.1k
views
`emptyDrops()` calling 'too many' non-empty droplets
DropletUtils emptyDrops scRNA scRNAseq 10x
3.3 years ago • updated 3.2 years ago Peter Hickey ▴ 760
1
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1
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1.5k
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Number of non-empty drops returned by emptyDrops() depends on value of test.ambience
DropletUtils emptyDrops 10x
updated 4.8 years ago by ★ 29k • written 4.8 years ago by ▴ 760
4
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5
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2.9k
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emptyDrops identified less non-empty cells with lower total UMI counts?
DropletUtils scRNA-seq emptyDrops simplesinglecell cell calling
updated 5.0 years ago by ★ 29k • written 6.2 years ago by ▴ 140
5
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1
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5.5k
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Error with DropletUtils::EmptyDrops()
DropletUtils EmptyDrops simpleSingleCell
updated 3.2 years ago by ▴ 40 • written 6.3 years ago by ▴ 20
0
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2
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1.6k
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Scalability of emptyDrops() running times
dropletutils emptydrops
updated 6.5 years ago by ★ 29k • written 6.5 years ago by • 0
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