Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
emptydrops
•
reset
0
votes
11
replies
1.1k
views
emptyDrops new default alpha = Inf giving far fewer non-empty droplets than under old default of alpha = NULL
scrn
10x
scRNAseq
emptyDrops
DropletUtils
6 months ago
Peter Hickey
▴ 760
0
votes
2
replies
1.3k
views
Non-empty droplets versus good quality cells
CellRanger
emptyDrops
scRNAseq
10X
23 months ago
rocanja
▴ 60
0
votes
1
reply
1.7k
views
Choosing the right lower limit for emptyDrops
SingleCell
emptyDrops
10X
updated 2.8 years ago by
Peter Hickey
▴ 760 • written 2.8 years ago by
sandra.garces.19
• 0
4
votes
5
replies
5.3k
views
`emptyDrops()` calling 'too many' non-empty droplets
DropletUtils
emptyDrops
scRNA
scRNAseq
10x
3.6 years ago • updated 3.5 years ago
Peter Hickey
▴ 760
1
vote
1
reply
1.8k
views
Number of non-empty drops returned by emptyDrops() depends on value of test.ambience
DropletUtils
emptyDrops
10x
updated 5.1 years ago by
Aaron Lun
★ 29k • written 5.1 years ago by
Peter Hickey
▴ 760
4
votes
5
replies
3.3k
views
emptyDrops identified less non-empty cells with lower total UMI counts?
DropletUtils
scRNA-seq
emptyDrops
simplesinglecell
cell calling
updated 5.4 years ago by
Aaron Lun
★ 29k • written 6.5 years ago by
C T
▴ 140
5
votes
1
reply
5.7k
views
Error with DropletUtils::EmptyDrops()
DropletUtils
EmptyDrops
simpleSingleCell
updated 3.6 years ago by
Stefano Mangiola
▴ 40 • written 6.6 years ago by
shbrief
▴ 20
0
votes
2
replies
1.8k
views
Scalability of emptyDrops() running times
dropletutils
emptydrops
updated 6.8 years ago by
Aaron Lun
★ 29k • written 6.8 years ago by
rosano
• 0
8 results • Page
1 of 1
Recent ...
Replies
Answer: Inconsistencies between accessor functions for TxDb databases with selected seql
by
a2a2hd42aa
• 0
Technical inconsistencies in database accessors can disrupt your workflow, but finding a reliable source to download online mobile games sh…
Comment: Can sample-level weights be used when analysing GSVA scores in limma?
by
A.Barden
▴ 20
Thanks both for this useful information.
Comment: Reproducibility of code in various Bioconductor versions
by
Gordon Smyth
53k
SNPlocs.Hsapiens.dbSNP155.GRCh38 is available for download from the same location as always. It has not changed since Bioc 3.20: Presumabl…
Comment: Changing multiple display parameters of a specific exon in GeneRegionTrack
by
a2a2hd42aa
• 0
Similarly, for structural complexity in the [He777 Game][1] APK, having precise control over every detail is what makes a high-performance …
Answer: Issue loading and downloading Bioconductor 3.22 packages after update
by
strawberry3
• 0
Hi, thank you all for the advice. Using James's advice, I managed to install SNPlocs.Hsapiens.dbSNP155.GRCh38, but it took almost half an …
Votes
Do I map probes to gene symbols BEFORE or AFTER differentially expressed gene analysis?
Answer: Can sample-level weights be used when analysing GSVA scores in limma?
Answer: Can sample-level weights be used when analysing GSVA scores in limma?
Comment: Can sample-level weights be used when analysing GSVA scores in limma?
Answer: Issue loading and downloading Bioconductor 3.22 packages after update
Awards
• All
Popular Question
to
Gordon Smyth
53k
Popular Question
to
Matan G.
▴ 60
Popular Question
to
Jaqueline
• 0
Popular Question
to
Dario Strbenac
★ 1.6k
Popular Question
to
chirag.parsania
▴ 10
Locations
• All
Germany,
15 minutes ago
United States,
18 minutes ago
Germany,
1 hour ago
Indonesia,
2 hours ago
Belgium,
2 hours ago
Traffic: 1026 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6