Showing : GO • reset
0
votes
5
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1.6k
views
reducing RangedData
GO GO
16.1 years ago Robert Castelo ★ 3.4k
0
votes
11
replies
3.8k
views
Very low P-values in limma
miRNA Microarray Normalization GO vsn limma microRNA miRNA Microarray Normalization GO
updated 16.1 years ago by ★ 1.3k • written 16.1 years ago by 53k
0
votes
0
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2.2k
views
qPCR Events and 30% Discount on qPCR workshops
miRNA qPCR Epigenetics GO Visualization Network probe microRNA miRNA qPCR Epigenetics
16.1 years ago qPCR Platform - the reference in real-t… ▴ 170
0
votes
0
replies
1.4k
views
From DE genes to enriched TF binding sites?
GO biomaRt GO biomaRt
16.1 years ago An De Bondt ▴ 40
0
votes
0
replies
565
views
H1N1 Swine Flu + H5N1 Avian Flu Conference & Exhibit November 12-13, 2009 Las Vegas, Nevada
GO GO
16.1 years ago Alicia Sommers ▴ 10
0
votes
2
replies
9.8k
views
an apparently strange case of 'Warning: number of items to replace is not a multiple of replacement length'
GO hgug4112a GO hgug4112a
updated 16.1 years ago by 68k • written 16.1 years ago by ▴ 390
0
votes
1
reply
934
views
GSEA
GO probe GO probe
updated 16.1 years ago by 68k • written 16.1 years ago by ▴ 10
0
votes
2
replies
1.6k
views
biomaRt query
GO hgu133a GO hgu133a
updated 16.1 years ago by ▴ 600 • written 16.1 years ago by ★ 1.1k
0
votes
2
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1.2k
views
Extract top-ranked genes from model fit
Annotation GO hgu133a Annotation GO hgu133a
updated 16.1 years ago by 68k • written 16.1 years ago by ▴ 310
0
votes
0
replies
1.1k
views
flowCore: inverse logicle transformation of flow cytometry data
GO Cancer flowCore GO Cancer flowCore
16.1 years ago Nishant Gopalakrishnan ▴ 340
0
votes
1
reply
1.2k
views
flowCore: inverse logicle transformation of flow cytometry data
GO Cancer flowCore GO Cancer flowCore
updated 16.1 years ago by ▴ 50 • written 16.1 years ago by ▴ 340
0
votes
1
reply
1.2k
views
Searching miRNA probe ids and annotating probe id lists
miRNA GO cdf probe affy RankProd miRNA GO cdf probe affy RankProd
updated 16.1 years ago by 21k • written 16.1 years ago by ▴ 10
0
votes
0
replies
941
views
bug? universeMappedCount for KEGGHyperG tests in GOstats
GO GO
16.1 years ago Cei Abreu-Goodger ▴ 830
0
votes
2
replies
1.3k
views
annotation for illumina mouse-6 arrays? & GOstats
Annotation GO GOstats Annotation GO GOstats
updated 16.1 years ago by ★ 1.1k • written 16.2 years ago by ▴ 50
0
votes
0
replies
1.3k
views
Ensembl mart release 56: Useful information
GO Anopheles gambiae Drosophila melanogaster genomes GO Anopheles gambiae genomes
16.2 years ago Rhoda Kinsella ▴ 660
0
votes
0
replies
1.1k
views
only 9-digit refseq IDs when using custom CDF for mouse4302 array
GO mouse4302 cdf affy GO mouse4302 cdf affy
16.2 years ago Jarek Bryk ▴ 110
0
votes
10
replies
2.9k
views
Retrieve Entrez IDs for enriched GO terms
Microarray Annotation GO limma GOstats biomaRt Microarray Annotation GO limma GOstats
updated 16.2 years ago by ★ 2.0k • written 16.2 years ago by ▴ 90
0
votes
4
replies
1.5k
views
AnnotationDBI
Annotation GO AnnotationDbi Annotation GO AnnotationDbi
updated 16.2 years ago by ★ 7.2k • written 16.2 years ago by ▴ 50
0
votes
4
replies
2.2k
views
Gene Ontology analysis for non-affy data
GO GOstats topGO GO GOstats topGO
updated 16.2 years ago by ▴ 400 • written 16.2 years ago by ▴ 50
4
votes
2
replies
3.2k
views
error with display of significant nodes using topGO
GO hgu133plus2 topGO GO hgu133plus2 topGO
updated 16.2 years ago by ▴ 400 • written 16.2 years ago by ▴ 340
0
votes
2
replies
2.8k
views
annotation and GO for non-model organism
Microarray Annotation GO Organism Microarray Annotation GO Organism
updated 16.2 years ago by ★ 7.2k • written 16.2 years ago by ▴ 150
0
votes
2
replies
1.3k
views
error with "retrain" method of gene2pathway package
Pathways GO Organism Homo sapiens hgu133plus2 gene2pathway Pathways GO Organism
updated 16.2 years ago by 68k • written 16.2 years ago by ▴ 340
0
votes
1
reply
1.6k
views
Gene ID of yeast in GOSemSim and other GO related package may need update
Annotation GO Yeast biomaRt GOSemSim GOSim Annotation GO Yeast biomaRt GOSemSim GOSim
updated 16.2 years ago by ★ 7.2k • written 16.2 years ago by ▴ 20
0
votes
0
replies
1.3k
views
How to compare GO results
Annotation GO topGO goProfiles Annotation GO topGO goProfiles
16.2 years ago Johannes Hanson ▴ 30
0
votes
2
replies
1.5k
views
GO.db and Gostats question
Annotation GO PROcess GOstats Annotation GO PROcess GOstats
updated 16.2 years ago by ★ 7.2k • written 16.2 years ago by ▴ 570
0
votes
3
replies
1.5k
views
EBImage package loading error due to configuration of gtk
GO EBImage GO EBImage
updated 16.2 years ago by ★ 13k • written 16.2 years ago by ▴ 20
0
votes
1
reply
1.1k
views
GOstats error
Annotation GO Annotation GO
updated 16.2 years ago by ▴ 30 • written 16.2 years ago by ▴ 370
0
votes
0
replies
852
views
Different gcrma output values after upgrade BioC 2.0 -> 2.4
Microarray Normalization GO hgu133plus2 rgu34a probe gcrma Microarray Normalization GO
16.2 years ago Rullmann, J.A.C. Ton ▴ 40
0
votes
3
replies
2.5k
views
"topGOdata" object: How to supply gene scores with a predefined list of genes
GO GO
updated 16.2 years ago by ▴ 400 • written 16.3 years ago by ▴ 300
0
votes
2
replies
1.2k
views
How to compare GO results
GO topGO GO topGO
updated 16.3 years ago by ▴ 90 • written 16.3 years ago by ▴ 30
0
votes
3
replies
1.2k
views
FW: XPS crahses R session
Annotation GO xps Annotation GO xps
updated 16.3 years ago by ★ 4.1k • written 16.3 years ago by ★ 3.9k
0
votes
0
replies
1.1k
views
XPS crahses R session
Annotation GO xps Annotation GO xps
16.3 years ago Guido Hooiveld ★ 4.1k
0
votes
0
replies
901
views
snapCGH plotting
GO graph snapCGH GO graph snapCGH
16.3 years ago Boris Umylny ▴ 120
0
votes
3
replies
1.8k
views
Examples outdated in "Bioinformatics and Computational Biology Solutions Using R and Bioconductor"
Annotation GO hgu133a Annotation GO hgu133a
updated 16.3 years ago by ▴ 950 • written 16.3 years ago by ★ 2.0k
0
votes
1
reply
1.0k
views
GO annotations
GO GO
updated 16.3 years ago by ★ 7.2k • written 16.3 years ago by ▴ 870
0
votes
0
replies
3.3k
views
[Genome] "Error Unrecognized format line 1..." when using "Add Custom Tracks"
GO GO
16.3 years ago Peng Yu ▴ 950
0
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0
replies
1.0k
views
question about ontoCompare() performance change
GO PROcess goTools GO PROcess goTools
16.3 years ago Oana VIGY ▴ 80
0
votes
2
replies
958
views
GO.db query error?
GO GO
updated 16.3 years ago by ★ 7.2k • written 16.3 years ago by ★ 1.1k
0
votes
1
reply
1.3k
views
Bug in metaArray package
GO hgu133a MergeMaid metaArray GO hgu133a MergeMaid metaArray
updated 16.3 years ago by 25k • written 16.3 years ago by ▴ 500
0
votes
0
replies
1.1k
views
build.mappings() from Agi4x44PreProcess is not helping me today
GO GUI hgug4112a limma PROcess Agi4x44PreProcess GO GUI hgug4112a limma PROcess
16.4 years ago Massimo Pinto ▴ 390
0
votes
3
replies
1.2k
views
Error in summary(hyperGtest)
Annotation GO hgu133plus2 Annotation GO hgu133plus2
updated 16.4 years ago by 68k • written 16.4 years ago by ▴ 270
0
votes
1
reply
963
views
RMA normalization issue
GO GO
updated 16.4 years ago by 16k • written 16.4 years ago by ▴ 10
0
votes
2
replies
2.4k
views
GO categories in R for A. Thaliana
GO Arabidopsis thaliana GO Arabidopsis thaliana
updated 16.4 years ago by ★ 7.2k • written 16.4 years ago by ▴ 90
1
vote
2
replies
6.2k
views
biomaRt: getting start and end locations of gene on chromosome
GO biomaRt GO biomaRt
updated 16.4 years ago by 68k • written 16.4 years ago by ★ 1.1k
0
votes
0
replies
570
views
Info about GO package
GO GO
16.4 years ago michael watson IAH-C ★ 3.4k
0
votes
1
reply
873
views
neverending GO problems
GO GO
updated 16.4 years ago by ★ 3.4k • written 16.4 years ago by ▴ 200
0
votes
0
replies
1.1k
views
I: Help with symbol names mapping between miRecords and BioMart
GO Homo sapiens biomaRt GO Homo sapiens biomaRt
16.4 years ago mauede@alice.it ▴ 870
0
votes
0
replies
620
views
[Fwd: neverending GO problems]
GO GO
16.4 years ago Barbara Cegielska ▴ 200
0
votes
0
replies
806
views
Fwd: Re: which package can do GSEA for no model organism
Annotation GO Organism GOstats topGO ASSIGN Annotation GO Organism GOstats topGO ASSIGN
16.4 years ago Pengcheng Yang ▴ 40
0
votes
0
replies
1.4k
views
Annotation.db: how automatically call a mapping?
Annotation GO moe430a affy limma annaffy affycoretools Annotation GO moe430a affy limma
16.4 years ago James W. MacDonald 68k
1,936 results • Page 22 of 39
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Answer: Guidance Requested on GCN Network Analysis and Module Enrichment in R by Kevin Blighe ★ 4.0k
The discrepancy between `final_exp1` and `final_exp2` could arise from several factors, despite matching dimensions. The `identical()` func…
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Hello Luna. The findUORFs function in ORFik identifies upstream open reading frames by extracting and concatenating the sequences of exo…
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Your observation aligns with the expected behavior of Mutect2 in tumor-only mode, where the panel of normals (PON) integrates into the vari…
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The empty rectangles that you observe in the treemap plot generated by the `rrvgo` package occur because the underlying `treemap` package d…
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The error you encounter when setting `gRNA.size = 24` occurs because the default `weights` vector has a length of 20, which mismatches the …
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Answer: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Post translational modifications and phosphoproteomics in limpa?
Answer: Post translational modifications and phosphoproteomics in limpa?
Answer: Identifying differentially expressed genes in individual samples from a large co
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