9 months ago
LaureTomas
▴
10
1
vote
0
replies
400
views
0
votes
0
replies
606
views
1
vote
7
replies
1.6k
views
updated 3.7 years ago by
Aaron Lun
★
28k
•
written 3.7 years ago by
Marco Blanchette
▴
30
0
votes
5
replies
1.0k
views
3.9 years ago
dogancan
•
0
0
votes
4
replies
797
views
0
votes
4
replies
1.1k
views
updated 4.2 years ago by
liz.ingsimmons
▴
140
•
written 4.2 years ago by
Marco Blanchette
▴
30
2
votes
3
replies
768
views
updated 4.9 years ago by
liz.ingsimmons
▴
140
•
written 4.9 years ago by
ls760
•
0
0
votes
3
replies
1.4k
views
updated 5.0 years ago by
liz.ingsimmons
▴
140
•
written 5.0 years ago by
Nik dAK
▴
10
0
votes
2
replies
1.2k
views
updated 5.4 years ago by
liz.ingsimmons
▴
140
•
written 5.4 years ago by
ferbecneu
•
0
2
votes
5
replies
1.3k
views
5
votes
4
replies
2.5k
views
8.0 years ago
enricoferrero
▴
660
0
votes
2
replies
1.1k
views
updated 8.2 years ago by
liz.ingsimmons
▴
140
•
written 8.2 years ago by
tangming2005
▴
190
3
votes
5
replies
2.0k
views
updated 8.3 years ago by
Malcolm Perry
▴
40
•
written 8.3 years ago by
tangming2005
▴
190
Recent ...
Replies
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
by
ussarizona
•
0
Hi Michael,
Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…
Answer: Deseq2. decontXcounts not integers. Useful alternative?
by
Michael Love
41k
Another option would be to put the per sample estimated contamination in the design. This is for example how RUV etc help remove spurious D…
Answer: ATACseq merge peaks
by
ATpoint
★
4.0k
That depends on your analysis. Typically, for differential analysis (and convenience) you would produce a single set of peaks (e.g. by merg…
Comment: Deseq2. decontXcounts not integers. Useful alternative?
by
camp
▴
10
Yes, @atpoint is correct. decontX decontaminated counts are not integers due to the way the variation inference algorithm works, but you ca…
Comment: Deseq2. decontXcounts not integers. Useful alternative?
by
ATpoint
★
4.0k
I do not know this decontamination tool you use but generally:
If these counts are basically "corrected" raw counts in the sense that they'…
Votes
Awards
• All
Locations
• All
United States, just now
France, 3 minutes ago
Sweden, 6 minutes ago
The Netherlands, 7 minutes ago
Sweden, 8 minutes ago
United States, just now
France, 3 minutes ago
Sweden, 6 minutes ago
The Netherlands, 7 minutes ago
Sweden, 8 minutes ago
Traffic: 1133 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6