Bioconductor HiTC

Showing : HiTC • reset

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2.4k

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HiTC gothic diffhic HiC

8.6 years ago Bogdan ▴ 670

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2.1k

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hi-c HiTC fourcseq

8.5 years ago • updated 8.4 years ago Nicolas Servant ▴ 260

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1.4k

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HiTC

updated 7.1 years ago by Nicolas Servant ▴ 260 • written 7.1 years ago by enrique.vidal ▴ 10

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1.6k

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HiTC IRanges windows debian

updated 6.1 years ago by Nicolas Servant ▴ 260 • written 6.1 years ago by René Wiegandt • 0

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1.2k

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HiTC HiTC

updated 11.2 years ago by Martin Morgan 25k • written 11.2 years ago by Hermann Norpois ▴ 170

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1.3k

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Annotation HiTC Annotation HiTC

updated 11.2 years ago by Valerie Obenchain ★ 6.8k • written 11.2 years ago by Hermann Norpois ▴ 170

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2.6k

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BSgenome hexbin BSgenome IRanges genomeIntervals GenomicRanges girafe Rsamtools HiTC HiTC

updated 11.1 years ago by Dan Tenenbaum ★ 8.2k • written 11.1 years ago by Wim Kreinen ▴ 100

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1.3k

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HiTC

updated 2.8 years ago by ahmed.abbaselmahdi • 0 • written 4.8 years ago by Konstantin Okonechnikov ▴ 40

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859

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HiTC

8.7 years ago Bogdan ▴ 670

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1.0k

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importing HiTC

9.0 years ago gugpuccio ▴ 10

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1.1k

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HiTC

5.9 years ago cath ▴ 30

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1.4k

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Hi-C HiTC

5.8 years ago ta_awwad ▴ 10

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885

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HiTC importC sparseMatrix

23 months ago • updated 22 months ago shikha • 0

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897

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HiTC HiC-Pro

4.2 years ago sergio.espeso-gil • 0

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1.2k

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hic-c hitc fourcseq

8.5 years ago Nicolas Servant ▴ 260

15 results • Page 1 of 1

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Comment: Deseq2. decontXcounts not integers. Useful alternative? by ATpoint ★ 4.0k

I do not know this decontamination tool you use but generally: If these counts are basically "corrected" raw counts in the sense that they'…

Answer: Improving the design matrices vignette in RNAseq123 by Gordon Smyth 50k

Thanks to Shian Su, we have confirmed that the problem in the design matrices vignette html is caused by a bug in knitr 1.44 (to do with sp…

Comment: Opposite sign of LFC in count plots of DEGs (DESeq2) by winwater0928 • 0

Thank you for your comment! I'll review my code from top to bottom.

Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k

So basically you are using HTML markup to set your subscripts and whatnot, and then `element_markdown` does the rest.

Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k

Oh snap. Foiled again. Here it is with spaces & ge ; and & lt ;

Votes

Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)

biomaRt error: database disk image is malformed

Comment: biomaRt : No lock file for BiocFileCache

Answer: Cross-species analysis - how to compute the mid parent value?

Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2

Awards • All

Scholar to James W. MacDonald 65k

Supporter to JKim • 0