Bioconductor MAplot

Showing : MAplot • reset

votes

replies

1.4k

views

DESeq2 MAplot

updated 21 months ago by ATpoint ★ 4.5k • written 21 months ago by Michael • 0

votes

replies

2.7k

views

MAplot

22 months ago Nathalie ▴ 20

votes

replies

3.1k

views

DESeq2 MAplot deseq

updated 3.7 years ago by Michael Love 43k • written 3.7 years ago by sp • 0

vote

939

views

deseq2 MAplot lfcshrink

updated 4.2 years ago by Michael Love 43k • written 4.2 years ago by evelas13 • 0

vote

replies

723

views

deseq2 maplot annotation

updated 5.0 years ago by Michael Love 43k • written 5.0 years ago by rbronste ▴ 60

votes

replies

3.0k

views

diffbind R MAplot Chipseq

updated 5.5 years ago by Rory Stark ★ 5.2k • written 5.5 years ago by melnuesch ▴ 10

votes

replies

1.6k

views

deseq2 MAplot

6.0 years ago avitalwasser • 0

votes

replies

1.4k

views

deseq2 maplot

updated 6.0 years ago by James W. MacDonald 67k • written 6.0 years ago by rbronste ▴ 60

votes

replies

1.3k

views

deseq2 normalization maplot rnaseq

updated 6.1 years ago by Michael Love 43k • written 6.1 years ago by ma619 • 0

votes

1.7k

views

MAPLOT DESEQ2 RNASEQ

updated 6.8 years ago by Michael Love 43k • written 6.8 years ago by phurbusang • 0

votes

2.3k

views

deseq2 maplot subset

updated 6.8 years ago by Michael Love 43k • written 6.8 years ago by rbronste ▴ 60

votes

replies

1.9k

views

diffbind maplot

updated 6.9 years ago by Rory Stark ★ 5.2k • written 6.9 years ago by grundelphine • 0

vote

replies

1.4k

views

diffbind deseq2 maplot

updated 7.1 years ago by Rory Stark ★ 5.2k • written 7.1 years ago by rbronste ▴ 60

votes

replies

2.9k

views

deseq2 maplot

updated 7.1 years ago by Michael Love 43k • written 7.1 years ago by jshouse ▴ 10

votes

replies

2.1k

views

edgeR MAplot rnaseq differential gene expression

updated 8.3 years ago by Gordon Smyth 51k • written 8.3 years ago by joseph.bergenstrahle • 0

votes

replies

1.4k

views

MAplot rnaseq cummerbund

8.6 years ago kritikamish99 ▴ 10

16 results • Page 1 of 1

Recent ...

Replies

Answer: Deseq2 res Function by Michael Love 43k

> Does this mean the young and KO groups were numerators and denominators in the analysis, respectively? Read over the vignette and work…

Answer: ANOVA like approach of edgeR by Gordon Smyth 51k

You need to clarify whether interactions are present for the two factors in your study. In the two factors do not interact, then the code y…

Answer: Create Illmina bead summary data by Gordon Smyth 51k

GenomeStudio produces IDAT files that you can read using the `read.idat` function in limma. That is the recommended way to read GenomeStudi…

Comment: Help with RSEM counts: do I transpose matrix? by NB • 0

OK thank you.

Comment: Help with RSEM counts: do I transpose matrix? by James W. MacDonald 67k

You can ask here, but please read the `DESeq2` vignette first, which should answer most questions.

Votes

Comment: Is it recommended to analyze different tissues together when using edgeR

Answer: Deseq2 res Function

Answer: BiocNeighbours Utility for k-Nearest Neighbour Classification

Answer: ANOVA like approach of edgeR

Awards • All