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Mouse
•
reset
0
votes
0
replies
219
views
TFutils database
TFutils
mouse
gene
convert
12 months ago
nicocillari
• 0
3
votes
4
replies
564
views
AnnotationData package for Affymetrix HT MG-430 PM Array Plate
RNAseq
Affymetrix
Mouse
updated 19 months ago by
Guido Hooiveld
★ 3.2k • written 19 months ago by
olrema
• 0
1
vote
3
replies
1.3k
views
AnnotationHub timeout for Ensembl Mouse GTF
AnnotationHub
Ensembl
Mouse
AnnotationHub Ensembl
2.5 years ago
dmgatti
▴ 10
0
votes
3
replies
520
views
Choosing DESeq2 design for mice experiment
deseq2
mouse
rnaseq
4.5 years ago
Emilie
• 0
0
votes
1
reply
881
views
org.Mm.eg.db UNIPROT missing values
Annotation
mouse
UNIPROT
updated 4.7 years ago by
Mike Smith
★ 5.6k • written 4.7 years ago by
julie.chevalier
• 0
4
votes
1
reply
4.7k
views
Finding orthologous human/mouse ENSEMBL IDs
human
mouse
ensembl
annotationdbi
homologue
5.0 years ago • updated 4.9 years ago
Keith Hughitt
▴ 150
0
votes
1
reply
757
views
Annotation for Mouse Illumina Expression Chip V6.1.1
bead chip
Annotation
Mouse
Lumi
probeID2nuID
updated 5.8 years ago by
Andy Lynch
▴ 100 • written 5.8 years ago by
smt8n
• 0
0
votes
0
replies
845
views
News:
Ensembl release 82 is out!
biomart
ensembl
release82
variation
mouse
News
6.7 years ago
Thomas Maurel
▴ 790
5
votes
2
replies
1.8k
views
News:
Ensembl release 81 is out!
human
mouse
GRCh38
biomart
Ensembl
News
updated 6.9 years ago by
Sonali Arora
▴ 380 • written 6.9 years ago by
Thomas Maurel
▴ 790
9 results • Page
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Comment: Confused about the design matrix in edgeR: How to tell R to consider one level a
by
Gordon Smyth
45k
When I answered your original question, I assumed you would use the simplest possible code ``` Status <- factor(Sample_info$Status) ``` w…
Comment: Confused about the design matrix in edgeR: How to tell R to consider one level a
by
Mohamed
• 0
Thanks a lot, will try this and see.
Answer: Confused about the design matrix in edgeR: How to tell R to consider one level a
by
Steve Lianoglou
13k
> My question is why the design matrix named its last column ' StatusControl' and not 'statustreated' ? It's because the Intercept is th…
Comment: Italicise
by
Kevin Blighe
3.5k
Hi, can you compare the contents of your variable, `lab_italics` , versus those of the variable (`selectLab_italics`) that is produced in m…
Comment: Need help for ProStaR Stand-alone install
by
Wang
• 0
Hi, I have installed the "Prostar" package, and loaded in my rstudio work session. But, when I trying to use the Prostar() for open a GUI …
Votes
Answer: Confused about the design matrix in edgeR: How to tell R to consider one level a
Answer: biomaRt error unable to fix: need help troubleshooting
Answer: edgeR : results from goana and kegga functions show opposite sig. p-value
Answer: paired analysis : return data matrix with indvidual/subject effects eliminated.
DESeq2: likelihood ratio test interpretation, multifactor
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Michael Love
37k
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svlachavas
▴ 780
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Gordon Smyth
45k
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Rory Stark
★ 4.4k
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JK Kim
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