Bioconductor PlotPCA

Showing : PlotPCA • reset

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41k

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plotPCA deseq2 labels

updated 7.3 years ago by Federico Marini ▴ 150 • written 7.3 years ago by al-ash ▴ 50

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7.1k

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deseq2 plotpca PCa

updated 6.5 years ago by Michael Love 41k • written 6.5 years ago by lirongrossmann ▴ 80

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6.4k

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plotpca DESeq2

2.3 years ago bjen731 ▴ 10

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DESeq2 plotPCA

2.3 years ago • updated 2.1 years ago synat.keam • 0

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3.1k

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DESeq2 plotPCA rlog transformation vsd

6.8 years ago Jane Merlevede ▴ 90

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plotPCA DESeq2 RUVSeq removebatcheffect()

3.0 years ago elizabethe819 • 0

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640

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plotMA ggplot2 plotPCA DESeq2

updated 7 months ago by Michael Love 41k • written 7 months ago by sara.jacobson • 0

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875

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DESeq2 RNASeq plotpca

updated 3.3 years ago by Michael Love 41k • written 3.3 years ago by s1760083 • 0

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369

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Rstudio plotPCA DESeq2

5 months ago yee • 0

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973

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pca plotpca

7.6 years ago marianarochadesouza • 0

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3.2k

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deseq2 rlog variancestabilizingtransformation plotpca pca

6.6 years ago lirongrossmann ▴ 80

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644

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deseq2 PlotPCA draw.triple.venn

updated 5.7 years ago by Michael Love 41k • written 5.7 years ago by N. Perera • 0

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613

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deseq2 plotpca

updated 5.7 years ago by Michael Love 41k • written 5.7 years ago by snp31 • 0

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deseq2 biplot plotpca

updated 4.3 years ago by Michael Love 41k • written 4.3 years ago by ecg1g15 ▴ 20

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plotPCA PCA

updated 13 months ago by hediatnani • 0 • written 13 months ago by Yijing • 0

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deseq2 plotPCA PCA rna-seq

8.0 years ago newsomew13 • 0

16 results • Page 1 of 1

Recent ...

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Answer: Method to find pathways different between 2 groups by Gordon Smyth 50k

> When I search camera limma on pubmed, I found 2 papers I am unclear what point you are trying to make. limma's camera method has been fo…

Comment: package goseq seems to be not available on the latest version of R by Gordon Smyth 50k

limma most certainly is available. It installs in R 4.4.0 and Bioc 3.19 for all platforms without any issues. It has not had any period of …

Comment: package goseq seems to be not available on the latest version of R by Patrycja ▴ 20

limma package also isn't available.Is there any information when these packages will be available?

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 41k

Check the number of bootstrapped data per chromosome compared to the original, and then you can also look at its distribution. For this it'…

Comment: DNAString: Standard checksum function? by Henrik Bengtsson ★ 2.4k

For completeness: SEGUID v2 (https://www.seguid.org/), implemented in CRAN package **[seguid](https://cran.r-project.org/package=seguid)*…

Votes

Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-

Handling multiple differential expression comparisons

Answer: fgsea significant result

package goseq seems to be not available on the latest version of R

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Scholar to ATpoint ★ 4.1k