Bioconductor RCy3

Showing : RCy3 • reset

vote

replies

414

views

igraph KEGGgraph RCy3 GraphNEL

3 months ago • updated 11 weeks ago Arindam ▴ 80

votes

replies

750

views

RCy3

7 months ago Matthew Thornton ▴ 380

vote

457

views

Cytoscape RCy3 RCy

updated 12 months ago by alex.pico ▴ 30 • written 12 months ago by David R ▴ 90

vote

1.2k

views

Network RCy3

updated 12 months ago by alex.pico ▴ 30 • written 12 months ago by David R ▴ 90

vote

646

views

RCy3 Cytohubba

updated 12 months ago by alex.pico ▴ 30 • written 12 months ago by jzhan067 ▴ 10

votes

replies

1.8k

views

Cytoscape RCy3 Networkvisualization WGCNA

19 months ago Ortega-C ▴ 10

vote

894

views

RCy3

updated 23 months ago by alex.pico ▴ 30 • written 23 months ago by adR ▴ 40

votes

replies

1.7k

views

GEOquery CancerData limma RCy3 CancerInSilico

updated 3.1 years ago by Steve Lianoglou ★ 13k • written 3.1 years ago by Caitlin ▴ 50

vote

replies

1.1k

views

rcy3

updated 4.0 years ago by alex.pico ▴ 30 • written 5.0 years ago by hanna226613 ▴ 10

vote

replies

1.6k

views

Cytoscape Pathways Wikipathways rWikiPathways RCy3

4.1 years ago • updated 4.0 years ago Emilia ▴ 40

votes

912

views

RCy3 Cytoscape R Newick Bioconductor

updated 4.0 years ago by alex.pico ▴ 30 • written 4.5 years ago by ellisjc • 0

votes

replies

1.6k

views

RCy3 Cytoscape Rgraphviz GOstats

5.6 years ago Matthew Thornton ▴ 380

12 results • Page 1 of 1

Recent ...

Replies

Answer: DESeq error: counts matrix should be numeric, currently it has mode: character by ATpoint ★ 4.6k

R thinks your data are characters (e.g. "1", "2", instead of 1, 2) so given that your `counts_data` indeed only contains counts, do: `mo…

Comment: Any tools to convert .gff to .gtf format by ControlF5 • 0

Yes, the Appsierra team recently built a tool to convert .gff to .gtf format. [ControlF5][1] is providing the best software testing service…

Comment: EuroBioC2024 abstract submission is open! by Alan Downey • 0

EuroBioC2024 has opened its abstract submission process, presenting an exciting opportunity for researchers to contribute to groundbreaking…

Comment: ChAMP.DMR error - Error in makeGenomicRatioSetFromMatrix by O'Brien • 0

Consult the ChAMP.DMR documentation for more information on supported array types and expected data formats: https://bioconductor.org/packa…

Answer: combining raw counts and estimated counts by O'Brien • 0

It is possible to combine raw counts from TCGA and estimated counts from GEO datasets (Kalisto pseudoalignment) while mitigating batch effe…

Votes

A: GWAS analysis with Illumina HumanOmni5-4 BeadChip - recommended software and wor

A: RNA-seq Normalisation - normalise all samples in experiment or only the ones use

Answer: Can DESeq2's design compensate for sequencing experimental design shortcomings?

Comment: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio

Awards • All