Bioconductor RCy3

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igraph KEGGgraph RCy3 GraphNEL

14 months ago • updated 13 months ago Arindam ▴ 80

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RCy3

18 months ago Matthew Thornton ▴ 390

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692

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Cytoscape RCy3 RCy

updated 23 months ago by alex.pico ▴ 30 • written 23 months ago by David R ▴ 90

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Network RCy3

updated 23 months ago by alex.pico ▴ 30 • written 23 months ago by David R ▴ 90

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RCy3 Cytohubba

updated 23 months ago by alex.pico ▴ 30 • written 23 months ago by jzhan067 ▴ 10

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Cytoscape RCy3 Networkvisualization WGCNA

2.5 years ago Ortega-C ▴ 10

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RCy3

updated 2.9 years ago by alex.pico ▴ 30 • written 2.9 years ago by adR ▴ 40

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GEOquery CancerData limma RCy3 CancerInSilico

updated 4.0 years ago by Steve Lianoglou ★ 13k • written 4.0 years ago by Caitlin ▴ 50

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rcy3

updated 4.9 years ago by alex.pico ▴ 30 • written 5.9 years ago by hanna226613 ▴ 10

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Cytoscape Pathways Wikipathways rWikiPathways RCy3

5.0 years ago • updated 4.9 years ago Emilia ▴ 40

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1.2k

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RCy3 Cytoscape R Newick Bioconductor

updated 4.9 years ago by alex.pico ▴ 30 • written 5.4 years ago by ellisjc • 0

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RCy3 Cytoscape Rgraphviz GOstats

6.5 years ago Matthew Thornton ▴ 390

12 results • Page 1 of 1

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Comment: upstream git branches of bioc-release by TrentonCollier99 • 0

Thank you very much for taking the time to answer the question. I really appreciate your insights and comments. https://bioc-release.r-univ…

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication? by Ahmed Salah • 0

Thank you very much! will take that into consideration

Comment: Large logFC but somewhat high FDR by JKim • 0

Thank you very much for taking the time to answer the question. I really appreciate your insights and comments.

Comment: upstream git branches of bioc-release by Jeroen ▴ 10

OK I have updated https://bioc-release.r-universe.dev accordingly. Let me know if you find version differences when mirroring binaries.

Comment: Large logFC but somewhat high FDR by Gordon Smyth 53k

I don't know what `tp1` is. The relevant histogram would be: ``` hist(fit2$p.value[,"KO_vs_WT"]) ```

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Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Answer: Large logFC but somewhat high FDR

Comment: upstream git branches of bioc-release

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