Bioconductor TCGAbiolinks

Showing : TCGAbiolinks • reset

votes

239

views

TCGAbiolinks TCGA clinical TCGA-BRCA

written 8 weeks ago by BioinfoMug • 0

votes

replies

157

views

MethylationArray normalize450K TCGAbiolinks Normalization MethylationArrayData

9 weeks ago • updated 7 weeks ago Giovanni Calice ▴ 160

vote

replies

180

views

TCGAMethylation450k MethylationArray TCGAbiolinks Tcga TCGAbiolinksGUI.data

10 weeks ago BioinfoMug • 0

votes

replies

176

views

TCGAbiolinks

12 weeks ago jain72744 • 0

votes

replies

307

views

TCGAbiolinks Survival

updated 12 weeks ago by Lluís Revilla Sancho ▴ 730 • written 12 weeks ago by tirordep • 0

votes

replies

161

views

TCGAbiolinks ChAMP

3 months ago Thalita • 0

votes

417

views

TCGAbiolinks error GDC_prepare

6 months ago leon • 0

votes

replies

254

views

clinical TCGAbiolinks

10 months ago BioInfoBeginnerrr • 0

votes

replies

1.2k

views

TCGAbiolinks

11 months ago Habil Zare ▴ 200

votes

626

views

TCGAbiolinks BatchQC BatchEffect

updated 8 months ago by wrab425 • 0 • written 14 months ago by snijesh ▴ 20

votes

replies

1.0k

views

TCGAWorkflowData TCGAbiolinks

updated 11 weeks ago by Marcel Ramos 690 • written 2.0 years ago by Emre • 0

vote

replies

3.1k

views

software error maftools tcgabiolinks

updated 7 weeks ago by snijesh ▴ 20 • written 6.6 years ago by Ramiro Magno ▴ 100

12 results • Page 1 of 1

Recent ...

Replies

Comment: Extremely small p-values using Limma for proteomic data by James W. MacDonald 65k

If you ever find yourself using the `@` function, you should reconsider what you are doing. There are vanishingly small instances when an e…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 42k

Here is some example code <https://gist.github.com/mikelove/cbbc84634b6854c865cb5eb08ad9b245>

Comment: How to use spike-in information (sequences from another species) with DESeq2::DE by maria.soler • 0

Hi, I have a question barely related to this topic. Do you use a custom reference genome combining your organism and the one used as a spik…

Answer: Differential gene expression analysis results by ATpoint ★ 4.1k

Pease do not open multiple posts for the same issue: https://support.bioconductor.org/p/9158194/#9158222 The support site is not meant f…

Comment: deseq2 results by sajadahmad41454 • 0

thank you for your response, should i remove or discard that sample? since the red outlier on left represents one of healthy samples.

Votes

Comment: Log-cpm values from limma

Comment: deseq2 results

Answer: Multi-factorial, longitudinal disease progression analysis with unbalanced patie

Awards • All