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UniProt
•
reset
2
votes
5
replies
3.3k
views
UniprotKB AC/ID to Entrez ID Conversion
ID
Uniprot
EntrezID
23 months ago
tom.kloter
• 0
3
votes
11
replies
4.9k
views
GO enrichment analysis on Solanum lycopersicum proteomics dataset (UniProt IDs)
clusterProfiler
AnnotationHub
GO
uniprot
updated 11 weeks ago by
Guido Hooiveld
★ 3.9k • written 3.2 years ago by
Alberto
• 0
1
vote
1
reply
902
views
UniProt.ws - Speeding up select() for data retrieval
UniProt.ws
UniProt
updated 3.4 years ago by
James W. MacDonald
65k • written 3.4 years ago by
JavierM
• 0
2
votes
3
replies
1.0k
views
Uniprot and UniProt.ws
Uniprot
Annotation
Identifiers
5.0 years ago
Juliet Hannah
▴ 360
4
votes
2
replies
846
views
drawProteins from Uniprot entry (missing chain information)
drawProteins
uniprot
updated 5.2 years ago by
James W. MacDonald
65k • written 5.2 years ago by
mblango
• 0
1
vote
4
replies
1.1k
views
UniProt.ws non-functional or abandoned?
uniprot.ws
uniprot
uniprot accessions
updated 5.4 years ago by
James W. MacDonald
65k • written 5.4 years ago by
balin
• 0
0
votes
2
replies
1.1k
views
Error retrieving data with biomaRt
biomart
r
getbm
uniprot
6.2 years ago
lluex.rova
• 0
0
votes
1
reply
1.1k
views
UniProt.ws - single database for two species
uniprot.ws
uniprot
updated 6.5 years ago by
James W. MacDonald
65k • written 6.5 years ago by
l.nilse
• 0
0
votes
1
reply
1.6k
views
org.Mm.eg.db UNIPROT missing values
Annotation
mouse
UNIPROT
updated 6.6 years ago by
Mike Smith
★ 6.5k • written 6.6 years ago by
julie.chevalier
• 0
1
vote
7
replies
1.9k
views
UniProt.ws report 1:many mappings in a single row
uniprot.ws
UniProt
annotation
7.4 years ago
l.nilse
• 0
0
votes
3
replies
1.1k
views
Accessing feature data of a Malus domestica Nimblegen microarray
nimblegen
Biomart
Uniprot
updated 7.4 years ago by
Gordon Smyth
50k • written 7.4 years ago by
theobroma22
▴ 10
4
votes
1
reply
1.6k
views
Converting Protein Accessions Into Protein Symbols
uniprot
uniprot.ws
8.2 years ago • updated 8.1 years ago
Dario Strbenac
★ 1.5k
2
votes
4
replies
3.0k
views
UniProt.ws version 2.10.2
uniprot.ws
subcellular location
uniprot
8.2 years ago
DHS
• 0
0
votes
3
replies
1.4k
views
Anotations Score of uniprot. ws
uniprot.ws
uniprot
updated 8.4 years ago by
James W. MacDonald
65k • written 8.4 years ago by
cerikahp
• 0
2
votes
2
replies
1.3k
views
Is there a package that has Uniprot protein descriptions?
uniprot.ws
uniprot
uniprot accessions
software error
updated 8.4 years ago by
James W. MacDonald
65k • written 8.4 years ago by
john
▴ 10
2
votes
14
replies
3.9k
views
Unimart not available in 2015?
biomart
uniprot
unimart
8.4 years ago
john
▴ 10
1
vote
4
replies
3.8k
views
problem with retrieving UniProt annotation data
uniprot.ws
uniprot
updated 9.2 years ago by
Marc Carlson
★ 7.2k • written 9.2 years ago by
Guido Hooiveld
★ 3.9k
0
votes
6
replies
2.3k
views
converting UniProt to SGD ids using UniProt.wd
uniprot.ws
uniprot
ensembl
updated 9.3 years ago by
Marc Carlson
★ 7.2k • written 9.3 years ago by
Joseph Barry
▴ 160
0
votes
2
replies
1.5k
views
Missing ensembl_ids in biomaRt uniprot query
biomaRt
uniprot
ensembl
updated 9.4 years ago by
me
• 0 • written 9.4 years ago by
António Miguel de Jesus Domingues
▴ 490
19 results • Page
1 of 1
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Comment: Deseq2. decontXcounts not integers. Useful alternative?
by
ATpoint
★ 4.0k
I do not know this decontamination tool you use but generally: If these counts are basically "corrected" raw counts in the sense that they'…
Answer: Improving the design matrices vignette in RNAseq123
by
Gordon Smyth
50k
Thanks to Shian Su, we have confirmed that the problem in the design matrices vignette html is caused by a bug in knitr 1.44 (to do with sp…
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
by
winwater0928
• 0
Thank you for your comment! I'll review my code from top to bottom.
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
So basically you are using HTML markup to set your subscripts and whatnot, and then `element_markdown` does the rest.
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
Oh snap. Foiled again. Here it is with spaces & ge ; and & lt ;
Votes
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
biomaRt error: database disk image is malformed
Comment: biomaRt : No lock file for BiocFileCache
Answer: Cross-species analysis - how to compute the mid parent value?
Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
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JKim
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Chris
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