Bioconductor VariantFiltering

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VariantAnnotation VariantFiltering

2.1 years ago Bogdan ▴ 670

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715

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VariantFiltering

updated 2.3 years ago by Robert Castelo ★ 3.4k • written 2.3 years ago by Andrew Beggs ▴ 90

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RNAseq123 VariantFiltering Alignment VariantAnnotation

updated 3.0 years ago by James W. MacDonald 68k • written 3.0 years ago by Mohamed ▴ 30

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bioconductor variantfiltering

8.2 years ago Claus.Hultschig • 0

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variantannotation variantfiltering

updated 8.6 years ago by Michael Lawrence ★ 11k • written 8.6 years ago by Bogdan ▴ 670

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VariantFiltering

10.3 years ago claire.simpson • 0

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sequencing transcription variantfiltering annotation News

10.3 years ago Matthew Ritchie ▴ 1000

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variantfiltering phastcons

updated 10.5 years ago by Robert Castelo ★ 3.4k • written 10.5 years ago by Stefanie Tauber ▴ 40

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VariantFiltering VariantFiltering

11.4 years ago Robert Castelo ★ 3.4k

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Comment: Join BOC Sciences at Drug Discovery Chemistry by teamardigen • 0

Sounds like an exciting event for anyone passionate about small molecule innovation. The focus on discovery and optimization really drives …

Comment: Could we detect difference at pathway level but not significant different at gen by Chi • 0

The extrusion process affects kibble texture flavor and digestibility shaping both nutrition and taste. Balance is keyjust like in http://r…

Comment: Could we detect difference at pathway level but not significant different at gen by Chi • 0

GSVA works when gene level changes are small but pathways shift as a group. After your analysis take a quick break with https://cookieclick…

Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in by dan.gatti • 0

I am, but perhaps I'm not understanding how it should work. > sse = DropletUtils::read10xCounts(curr_files[1], mtx.class = 'SVT_Sparse…

Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in by James W. MacDonald 68k

Did you use the development version as Aaron suggested? There is an argument to read the market matrix file directly into an `SVT_SparseMat…

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Drug datasets for RNA-seq

Comment: Check removeBatchEffect effectiveness

Comment: Streamlining the computing time for MiloDE p-value correction in large dataset?

Answer: DESeq2 design for haplotype MPRA

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