Bioconductor VariantFiltering

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VariantAnnotation VariantFiltering

2.2 years ago Bogdan ▴ 670

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VariantFiltering

updated 2.4 years ago by Robert Castelo ★ 3.4k • written 2.4 years ago by Andrew Beggs ▴ 90

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RNAseq123 VariantFiltering Alignment VariantAnnotation

updated 3.0 years ago by James W. MacDonald 68k • written 3.0 years ago by Mohamed ▴ 30

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bioconductor variantfiltering

8.3 years ago • updated 8.2 years ago Claus.Hultschig • 0

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variantannotation variantfiltering

updated 8.7 years ago by Michael Lawrence ★ 11k • written 8.7 years ago by Bogdan ▴ 670

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VariantFiltering

10.3 years ago claire.simpson • 0

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sequencing transcription variantfiltering annotation News

10.4 years ago Matthew Ritchie ▴ 1000

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variantfiltering phastcons

updated 10.6 years ago by Robert Castelo ★ 3.4k • written 10.6 years ago by Stefanie Tauber ▴ 40

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VariantFiltering VariantFiltering

11.5 years ago Robert Castelo ★ 3.4k

9 results • Page 1 of 1

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Answer: mzR-Rcpp compiler version issue by Laurent Gatto 1.6k

There are two issues here. First, a warning about mzR, that you can safely ignore. It tells you that mzR was compiled using a different …

Comment: Identifying differentially expressed genes in individual samples from a large co by jamie.gearing ▴ 60

Great. Yes, something descriptive is probably good enough, even if the p-values themselves are not so rigorous. Thanks very much Gordon!

Comment: Co-occurrence Network Analysis between Algae and Bacteria by Stefano Mangiola ▴ 40

Just a placeholder, that we are extending `sccomp` to co-occurrence analyses. Yours could be a good use-case to test first. We will be in t…

Answer: DESeq2 design for haplotype MPRA by aimesd808 • 0

I appreciate you telling me about this. Now it's crystal plain to me. Publish this: https://support.bioconductor.org/p/9162649/

Answer: Extract snp information from genomic regions with biomaRt -> "oaries_snp" by Kevin Blighe ★ 4.0k

My sincere apologies that my colleagues had ignored your question. The error occurs because the "chromosomal_region" filter is not valid…

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Answer: Identifying differentially expressed genes in individual samples from a large co

Bioconductor Seminar Series - Dec 2: Deep-learning Gene Perturbation Effect Prediction

Comment: What R/Bioconductor tools would you recommend for the analysis of sncRNA, specif

Comment: Error installing Seqinfo

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