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VariantFiltering
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Variant Filtering on very large VCF files
VariantAnnotation
VariantFiltering
15 months ago
Bogdan
▴ 670
0
votes
1
reply
575
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VariantFiltering error
VariantFiltering
updated 18 months ago by
Robert Castelo
★ 3.4k • written 18 months ago by
Andrew Beggs
▴ 90
0
votes
1
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2.0k
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Confused about understanding the output and statistics of BAM file after STAR aligning
RNAseq123
VariantFiltering
Alignment
VariantAnnotation
updated 2.2 years ago by
James W. MacDonald
67k • written 2.2 years ago by
Mohamed
▴ 30
0
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3
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1.6k
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library VaraintFiltration looking for explanation of pedigree file
bioconductor
variantfiltering
7.4 years ago
Claus.Hultschig
• 0
3
votes
2
replies
1.7k
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filtering VCF files
variantannotation
variantfiltering
updated 7.8 years ago by
Michael Lawrence
★ 11k • written 7.8 years ago by
Bogdan
▴ 670
0
votes
1
reply
1.3k
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Problems with autosomalRecessiveHomozygous
VariantFiltering
9.5 years ago
claire.simpson
• 0
4
votes
0
replies
1.7k
views
News:
Hands-on Bioconductor course, 7 Sept 2015, Tokyo
sequencing
transcription
variantfiltering
annotation
News
9.5 years ago
Matthew Ritchie
▴ 1000
1
vote
1
reply
1.5k
views
retrieving phastConsScores via 'scores' from 'VariantFiltering' shows inconsistency
variantfiltering
phastcons
updated 9.7 years ago by
Robert Castelo
★ 3.4k • written 9.7 years ago by
Stefanie Tauber
▴ 40
0
votes
0
replies
1.9k
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problems installing VariantFiltering package
VariantFiltering
VariantFiltering
10.6 years ago
Robert Castelo
★ 3.4k
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Comment: RnBeads::combine() - error?
by
Urotree
• 0
pheno <- rnb.set.arrays@pheno # Phenotypic data sites <- rnb.set.arrays@sites # CpG site definitions (data.frame) meth <- rnb.set…
Comment: RnBeads::combine() - error?
by
Urotree
• 0
![enter image description here][1] [1]: /media/images/40d9778d-b044-4405-9b3d-2ba835f6 Hi, after I convert to RnBiseqSet, it shows "All…
Comment: RnBeads::combine() - error?
by
Urotree
• 0
rnb.set.biseq <- RnBiseqSet( pheno = pheno, sites = sites, meth = meth, covg = NULL, # This can be NULL if coverage …
Answer: How to increase font for gene name and increase arrow size for GVIZ's ( UcscTra
by
ming
• 0
`fontsize` for title font size, `fontsize.group` for gene symbol font size tx.track <- GeneRegionTrack(hg38.gtf, …
Answer: How do I fix an odd voom plot in a combined dataset?
by
Gordon Smyth
52k
voom is a DE analysis method rather than a normalization method. voom expects the design matrix to be the same complete design matrix that …
Votes
Answer: enrichGOgradient color change
How do I fix an odd voom plot in a combined dataset?
Answer: Warning message when running limma with covariates
A: GWAS analysis with Illumina HumanOmni5-4 BeadChip - recommended software and wor
A: GWAS analysis with Illumina HumanOmni5-4 BeadChip - recommended software and wor
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