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News:
Final List of Deprecated Packages for Bioc3.14
ExperimentData
Deprecation
Software
Release
Workflow
2.6 years ago • updated 2.1 years ago
shepherl
3.9k
7
votes
4
replies
2.2k
views
Start to End RNA-Seq with R Bioconductor
Bioconductor
Workflow
updated 2.3 years ago by
Gordon Smyth
50k • written 2.3 years ago by
sarastew1994
• 0
2
votes
2
replies
1.5k
views
News:
Final List of Deprecated Packages for Bioc3.13
Workflow
Software
ExperimentData
Deprecation
3.4 years ago • updated 3.0 years ago
shepherl
3.9k
2
votes
3
replies
1.1k
views
RNA-Seq Workflow Example (not "airway") for R
RNA-Seq
Workflow
updated 4.9 years ago by
Gordon Smyth
50k • written 4.9 years ago by
detroit.drive
• 0
0
votes
2
replies
798
views
What is Software, Annotationdata, Experimentdata and workflow category?
Software
annotation
experiment
workflow
updated 3.7 years ago by
shepherl
3.9k • written 3.7 years ago by
gnanaprakash.s
• 0
0
votes
7
replies
3.0k
views
Issue installing RNA-seq workflow
software error
deseq2
workflow
rnaseqGene
updated 4.9 years ago by
Martin Morgan
25k • written 4.9 years ago by
pavan-bioconductor
• 0
1
vote
3
replies
774
views
typo in rnaseqGene workflow vignette.
rnaseqGene
workflow
deseq2
updated 4.3 years ago by
Michael Love
42k • written 4.3 years ago by
Assa Yeroslaviz
★ 1.5k
7 results • Page
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Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
42k
> Any suggestions for methylation data segmentation? I think the same segmentation can be used.
Comment: deseq2 results
by
swbarnes2
★ 1.3k
Cross-posted https://www.biostars.org/p/9594331/#9594458
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
by
Mike Smith
★ 6.5k
The other answers here are all good and demonstrate the issue with floating point comparisons nicely. I'd like to add that your particular…
Comment: More regions in union when increasing DBA$config$mergeOverlap
by
Ian D.
▴ 70
Nudging my question. I could do with confirmation before proceeding with my current projects. Thank you.
Comment: Extremely small p-values using Limma for proteomic data
by
Robert Castelo
★ 3.3k
From the point of view of visualization, I find handy the fact that raw p-values give more resolution than adjusted ones, which allows one …
Votes
A: Volcanoplot with limma - RAW P-values or Adj.P-Values
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Answer: minfi latest update for EPIC V2 chip
A: Error in DESeqDataSet : some values in assay are not integers
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DevelopingHippo
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