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Xvector
•
reset
0
votes
3
replies
681
views
Extracting values from out-of-bounds Rle Views
IRanges
XVector
AtomicList
written 23 months ago by
Pierre-Luc Germain
▴ 20
5
votes
4
replies
2.7k
views
XVector installation fails because zlib.h is not found
XVector
docker
Install
2.5 years ago • updated 2.4 years ago
RobKo
▴ 10
2
votes
1
reply
694
views
is check=FALSE safe in compact()?
XVector
updated 3.2 years ago by
Martin Morgan
25k • written 3.2 years ago by
robmaz77
▴ 20
2
votes
2
replies
2.0k
views
Error in installation of scran
S4Vectors
IRanges
XVector
GenomicRanges
scran
updated 5.3 years ago by
Aaron Lun
★ 28k • written 5.3 years ago by
Momo
• 0
0
votes
15
replies
2.0k
views
Looking for the source for IRanges 2.8.1, S4Vectors 0.12.1 and XVector 0.14.0
bioconductor
iranges
s4vectors
xvector
r 3.3.2
updated 5.8 years ago by
becker.gabriel
▴ 10 • written 5.8 years ago by
chokoiboko
• 0
0
votes
2
replies
1.2k
views
VariantAnnotation::locateVariants error coming from XVector
variantannotation
xvector
iranges
5.9 years ago
Vivek.b
▴ 100
2
votes
5
replies
4.4k
views
How to use subSeq with DNAStringSet and information of GroupedIRanges?
subseq
Xvector
dnastringset
updated 7.0 years ago by
Hervé Pagès
16k • written 7.0 years ago by
Sophie
• 0
0
votes
0
replies
853
views
Suggestion for a regression test in XVector
xvector
7.0 years ago
Charles Plessy
▴ 180
0
votes
5
replies
2.2k
views
Problem installing XVector package
software error
gcrma
Xvector
iranges
7.8 years ago • updated 7.7 years ago
gary_smith
• 0
0
votes
0
replies
1.1k
views
回复: XVector
Network
Cancer
IRanges
XVector
9.7 years ago
Hervé Pagès
16k
0
votes
0
replies
1.3k
views
XVector
Cancer
XVector
9.7 years ago
Hervé Pagès
16k
0
votes
7
replies
2.2k
views
VariantTools installation problem: dependencies not available
IRanges
GenomicRanges
VariantTools
XVector
IRanges
GenomicRanges
VariantTools
XVector
updated 10.5 years ago by
Michael Lawrence
★ 11k • written 10.5 years ago by
heyi xiao
▴ 360
1
vote
6
replies
4.4k
views
ERROR: compilation failed for package XVector
XVector
XVector
updated 10.8 years ago by
Hervé Pagès
16k • written 10.8 years ago by
Pengcheng Yang
▴ 60
13 results • Page
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Answer: limma Intercept vs No-intercept models completely changing DMR results?
by
Gordon Smyth
50k
You seem to have the misunderstanding that you can change the design matrix but keep all the other code unchanged. The contrasts are comput…
Answer: package goseq seems to be not available on the latest version of R
by
Gordon Smyth
50k
It is true that goseq isn't available for Bioc 3.19. That is because goseq depends on txbmaker, which is itself not yet available for Bioc…
Answer: limma Intercept vs No-intercept models completely changing DMR results?
by
James W. MacDonald
65k
This part: ``` design_intercept <- model.matrix(~Alt+Sex+Age+PC1, data=targets_Sherpa) colnames(design_intercept) <- c("AltSHP_LA","Al…
Comment: CombineArrays for EPIC and EPIC V2
by
Kim
• 0
Thank you Tim, this is a great help in getting me started!
Comment: Too many significant genes when integrating gtex and tcga
by
Michael Love
41k
Yes, this was one of the aspects we highlighted in the 2014 paper, and it's also in the workflow. Check these places first. Also take a st…
Votes
Answer: limma Intercept vs No-intercept models completely changing DMR results?
Answer: CombineArrays for EPIC and EPIC V2
Answer: Too many significant genes when integrating gtex and tcga
Comment: Too many significant genes when integrating gtex and tcga
A: Print Differentially Expressed Exons From Dexseq Results
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