Showing : affylmGUI • reset
1
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6
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1.2k
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Error while running affylmGUI
microarray limma affy affylmGUI
updated 5.2 years ago by 50k • written 5.2 years ago by • 0
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0
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1.0k
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Issues running affylmGUI
Cancer Breast affylmGUI Cancer Breast affylmGUI
13.4 years ago Lorenzo Melchor ▴ 50
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0
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717
views
affylmGUI problem with tkcmd
affylmGUI affylmGUI
17.4 years ago Wonjong Moon ▴ 80
0
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2
replies
885
views
affylmGUI problem with tkcmd
affylmGUI affylmGUI
updated 17.4 years ago by ▴ 80 • written 17.4 years ago by ★ 7.4k
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votes
0
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1.1k
views
BioC GUI development
Microarray Genetics GUI affy limma affylmGUI limmaGUI Microarray Genetics GUI affy
20.4 years ago James Wettenhall ▴ 1000
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0
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621
views
Re: affylmGUI figures estrogen data set
GO affylmGUI GO affylmGUI
20.0 years ago James Wettenhall ▴ 1000
0
votes
2
replies
878
views
affylmGUI
drosgenome1 affylmGUI drosgenome1 affylmGUI
updated 20.0 years ago by ▴ 1000 • written 20.0 years ago by ▴ 180
0
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1
reply
727
views
Is rma in affylmGUI different to affy rma?
affy affylmGUI affy affylmGUI
20.0 years ago Simon Kidd ▴ 180
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votes
0
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920
views
limmaGUI & affylmGUI wizards for Windows & bug fixes
Microarray Genetics cdf affylmGUI limmaGUI Microarray Genetics cdf affylmGUI limmaGUI
20.0 years ago James Wettenhall ▴ 1000
0
votes
0
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749
views
gcrma in affylmGUI
gcrma affylmGUI limmaGUI gcrma affylmGUI limmaGUI
19.9 years ago James Wettenhall ▴ 1000
0
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0
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1.0k
views
Re: affylmGUI
Genetics affylmGUI limmaGUI convert Genetics affylmGUI limmaGUI convert
19.9 years ago James Wettenhall ▴ 1000
0
votes
1
reply
917
views
Anopheles/malaria Affy chips
affy simpleaffy affylmGUI affy simpleaffy affylmGUI
updated 19.9 years ago by ▴ 950 • written 19.9 years ago by ▴ 510
0
votes
1
reply
752
views
affylmGUI
affylmGUI affylmGUI
updated 19.9 years ago by ▴ 1000 • written 19.9 years ago by ▴ 120
0
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0
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732
views
three way comparisons with affylmgui
affylmGUI affylmGUI
19.9 years ago Simon Kidd ▴ 180
0
votes
3
replies
1.2k
views
Error in parse() loading affylmGUI
affylmGUI affylmGUI
updated 19.9 years ago by ▴ 1000 • written 19.9 years ago by ▴ 340
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votes
1
reply
1.0k
views
loading CEL files in affylmGUI
Annotation affylmGUI Annotation affylmGUI
updated 19.9 years ago by ▴ 1000 • written 19.9 years ago by ▴ 60
0
votes
0
replies
675
views
affylmGUI fix (topTable/CDF name)
Annotation cdf affylmGUI Annotation cdf affylmGUI
19.9 years ago James Wettenhall ▴ 1000
0
votes
1
reply
1.1k
views
Re: Limma GUI exporting
Microarray limma affylmGUI limmaGUI Microarray limma affylmGUI limmaGUI
19.9 years ago James Wettenhall ▴ 1000
0
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0
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659
views
affylmGUI multiget
affylmGUI affylmGUI
19.9 years ago James Wettenhall ▴ 1000
0
votes
0
replies
649
views
affy and limma
Normalization affy affylmGUI convert Normalization affy affylmGUI convert
19.6 years ago Gareth Elvidge ▴ 10
0
votes
0
replies
682
views
affy and limma
Normalization affy affylmGUI convert Normalization affy affylmGUI convert
19.6 years ago Gordon Smyth 50k
0
votes
4
replies
1.5k
views
tkrplot in R2.0 on Mac OS X
affylmGUI affylmGUI
updated 19.5 years ago by ▴ 1000 • written 19.5 years ago by ▴ 100
0
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0
replies
662
views
Affymetrix CDF package
cdf affylmGUI cdf affylmGUI
19.3 years ago MShingyoji@lbl.gov ▴ 10
0
votes
2
replies
903
views
affylmGUI error when normalizing
Microarray Normalization affylmGUI Microarray Normalization affylmGUI
updated 19.2 years ago by ▴ 1000 • written 19.3 years ago by ▴ 30
0
votes
1
reply
636
views
Please help: AffylmGUI errors
Microarray affylmGUI ASSIGN Microarray affylmGUI ASSIGN
updated 19.2 years ago by ★ 7.4k • written 19.2 years ago by ▴ 30
0
votes
0
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708
views
affylmGUI - feedback, questions
gcrma GeneSpring affylmGUI gcrma GeneSpring affylmGUI
19.2 years ago SteffenMöller ▴ 30
0
votes
0
replies
877
views
Please help: AffylmGUI errors (more detail)
Normalization hgu133a affylmGUI ASSIGN Normalization hgu133a affylmGUI ASSIGN
19.2 years ago Aaron Hamilton ▴ 30
0
votes
0
replies
589
views
Re: [Bioc-devel] Error in mget(ls(cdfenv), env = rgu34aGENENAME) : Object "rgu34aGENENAME" not found
Annotation GO affylmGUI Annotation GO affylmGUI
19.2 years ago James Wettenhall ▴ 1000
0
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0
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533
views
AffylmGUI Comparisons and Filtering
Microarray affylmGUI Microarray affylmGUI
19.0 years ago Quentin Anstee ▴ 110
0
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3
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1.2k
views
Defining and handling replicates
GO affy limma affylmGUI GO affy limma affylmGUI
updated 18.9 years ago by 50k • written 18.9 years ago by ▴ 70
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0
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1.0k
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Question (vennDiagram vs. topTable) + Patch (plotTitle for vennDiagram) for AffylmGUI 1.3.0
affylmGUI affylmGUI
18.9 years ago Steffen Moeller ▴ 40
0
votes
5
replies
1.5k
views
Problem with Installing affylmGUI on MAC OS X
Cancer affylmGUI Cancer affylmGUI
18.8 years ago Richard Friedman ★ 2.0k
0
votes
0
replies
695
views
error message in affylmGUI on PC
Cancer affylmGUI Cancer affylmGUI
18.8 years ago Richard Friedman ★ 2.0k
0
votes
0
replies
793
views
Error messages in affylmGUI on PC with respect to plotting
Cancer limma affyPLM affylmGUI Cancer limma affyPLM affylmGUI
18.8 years ago Richard Friedman ★ 2.0k
0
votes
3
replies
914
views
Error messages in affylmGUI on PC with respect to plotting
limma affyPLM affylmGUI limma affyPLM affylmGUI
18.8 years ago Seth Falcon ★ 7.4k
0
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0
replies
757
views
Analisys with MAS5 and affyPLM
affylmGUI affylmGUI
18.8 years ago Pedro Botías ▴ 80
0
votes
1
reply
803
views
FW: Question (vennDiagram vs. topTable) for AffylmGUI 1.3.0
GO limma affylmGUI GO limma affylmGUI
updated 18.6 years ago by 50k • written 18.6 years ago by ▴ 50
0
votes
1
reply
837
views
Access to Affy chip annotation data in affylmGUI
mouse4302 affylmGUI mouse4302 affylmGUI
updated 18.3 years ago by ★ 7.4k • written 18.3 years ago by ▴ 10
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0
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934
views
Request for users of limmaGUI, affylmGUI, JSM2005 or IBC2004 microarray course websites or my R-Tcl/Tk examples
affylmGUI limmaGUI affylmGUI limmaGUI
18.3 years ago James Wettenhall ▴ 1000
0
votes
0
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496
views
AffylmGUI
affylmGUI affylmGUI
18.1 years ago Gordon Smyth 50k
0
votes
0
replies
916
views
LimmaGUI for illumina data
GUI limma affylmGUI limmaGUI GUI limma affylmGUI limmaGUI
18.0 years ago Roy Williams ▴ 10
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0
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991
views
LimmaGUI for illumina data
GUI affy limma affylmGUI limmaGUI beadarray GUI affy limma affylmGUI limmaGUI beadarray
17.9 years ago Mark Dunning ▴ 320
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3
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1.0k
views
Using CDF file on affylmGUI
Proteomics GO affylmGUI Proteomics GO affylmGUI
updated 17.5 years ago by ▴ 450 • written 17.5 years ago by ▴ 70
0
votes
5
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1.2k
views
CDF/Probe/Annotation for GNF1m custom chip
cdf probe affylmGUI cdf probe affylmGUI
updated 17.1 years ago by ★ 6.5k • written 17.1 years ago by ▴ 830
0
votes
0
replies
2.7k
views
[Bioc-devel] Tcl/TK pckage "Bwidget"
affylmGUI limmaGUI affylmGUI limmaGUI
17.0 years ago Keith Satterley ▴ 450
0
votes
0
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757
views
affylmGUI ver 1.10.2 bug fix in release branch
affylmGUI affylmGUI
16.9 years ago Keith Satterley ▴ 450
0
votes
3
replies
1.3k
views
limma gene symbol not avialable problem
cdf affy affydata limma affylmGUI affyio cdf affy affydata limma affylmGUI affyio
updated 16.9 years ago by 65k • written 16.9 years ago by ▴ 450
0
votes
0
replies
591
views
affylmGUI 1.10.4 fixes 3 errors in Bioconductor release version
affylmGUI affylmGUI
16.9 years ago Keith Satterley ▴ 450
0
votes
1
reply
1.1k
views
An error of affylmGUI
cdf affy affylmGUI affyio cdf affy affylmGUI affyio
updated 16.8 years ago by ▴ 450 • written 16.8 years ago by ▴ 450
0
votes
0
replies
734
views
affylmGUI: options for 'Export HTML Report'?
PROcess affylmGUI PROcess affylmGUI
16.6 years ago Keith Satterley ▴ 450
50 results • Page 1 of 1
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Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it by Hervé Pagès 16k
Indeed. Calculations involving floating point arithmetic are architecture-dependent, and testing the results should be done with `all.equal…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Poonam • 0
I will follow what you suggested. I didn't use max gap anywhere. I was following statistic I and regarding the size of features, my small…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 41k
Oh I see, for the second question, I don't have a great answer. I typically think of one set as the anchor, whose ascertainment is driving …
Comment: Help with running egsea() by James W. MacDonald 65k
Oh, right. Ideally you would use NCBI (aka Entrez gene) IDs because they are way more likely to be unique. Gene symbols are broken down int…
Comment: Help with running egsea() by Chris • 0
Thanks James! I update the question. The last question mean when we use `buildIdx()`, could we use gene symbol instead of entrezID. However…
Votes
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Help with running egsea()
Answer: Trim/Filter out-of-bounds GRanges
Comment: Help with running egsea()
Answer: How to save the DEXSeq results
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