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big data
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Job:
Postdoc and PhD student in Bioinformatics/Biostatistics
NGS
R
statistics
genomics
big data
Job
5.2 years ago • updated 4.4 years ago
Luo Weijun
★ 1.6k
0
votes
0
replies
864
views
Job:
Data Manager - BC Cancer Research Center, Vancouver BC
computational
genomic
big data
bioinformatics
Job
4.9 years ago
jmaanaki
• 0
0
votes
0
replies
947
views
Job:
Postdoctoral positions in drug discovery and genome data science
computational biology
biostatistics
big data
data science
drug discovery
Job
5.2 years ago
Thomas Girke
★ 1.7k
1
vote
2
replies
919
views
How to handle big data sets (>10GB) in Bioconductor packages?
big data
methylmix
memory problem
updated 5.7 years ago by
Martin Morgan
25k • written 5.7 years ago by
perdedorium
• 0
1
vote
1
reply
1.1k
views
Subsetting Rle with ORF-sequence-positions by the 3 frames
Rle
Big data
coverageByTranscript
6.0 years ago
hauken_heyken
▴ 80
0
votes
0
replies
1.3k
views
What is the recommended method for running WGCNA on large metatranscriptomic dataset?
wgcna
transcriptome
big data
metagenomics
gene expression
6.2 years ago
jol.espinoz
▴ 40
3
votes
1
reply
1.3k
views
AnnotationHub: confusing pValue/qValue for (some) Roadmap records
roadmap project
annotationhub
epigenomics
big data
updated 8.0 years ago by
Valerie Obenchain
★ 6.8k • written 8.0 years ago by
kevin.rue
▴ 350
0
votes
0
replies
2.1k
views
Job:
Postdoctoral Research Associate Position- Harvard Medical School (Probabilistic Algorithms and Software for Biomedical Big Data)
Probabilistic Algorithms
Big Data
Job
9.0 years ago
Doe, Aimee
▴ 40
8 results • Page
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Comment: More regions in union when increasing DBA$config$mergeOverlap
by
Ian D.
▴ 70
Hello. Thanks for the reply. Sorry about this. My testing is telling me that 1 is the default (a gap), not -1 (1bp overlap). Negative …
Comment: Differences in differential analysis methods for RNA-Seq
by
ATpoint
★ 4.1k
> I am just re-processing due to being uncertain about how they used the edgeR analysis to reach gene level edgeR devs published something…
Comment: Differences in differential analysis methods for RNA-Seq
by
james.zhang20
• 0
Thanks for the explanations, it has helped clarify some things. Unfortunately, I am working from an early access public dataset (https://do…
Answer: Deseq2 and Normalization of RNA sequencing data
by
ATpoint
★ 4.1k
There is no expectation of normality that is realistic in terms of expression level. Levels are widely different between genes, and counts …
Comment: Differences in differential analysis methods for RNA-Seq
by
ATpoint
★ 4.1k
MAGeCK is a command line tool that is easy to use. I recommend you use it because a) the logFCs from DESeq2 and MAGeCK will be very similar…
Votes
A: Error in DESeqDataSet : some values in assay are not integers
Bioconductor 3.19 is Released!
Bioconductor 3.19 is Released!
Answer: DEseq2 coefficient
SPIA plotP giving error
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