Bioconductor Bigwig

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2.2k

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DESeq2 edgeR bigwig limma

2.5 years ago • updated 2.3 years ago Bogdan ▴ 670

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replies

2.5k

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bedgraph wiggleplotr bigwig wig

updated 2.7 years ago by complaintguide • 0 • written 2.7 years ago by Bogdan ▴ 670

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1.9k

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bigWig RNASeqData

3.2 years ago bas_work ▴ 30

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2.4k

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software error BigWig import windows

5.1 years ago lsilva.m • 0

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2.5k

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wiggleplotr bigwig coverage ngs

updated 7.6 years ago by kaur.alasoo ▴ 30 • written 7.6 years ago by borgmichael • 0

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3.8k

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bigwig rtracklayer import granges grangeslist

updated 7.7 years ago by Michael Lawrence ★ 11k • written 7.7 years ago by Assa Yeroslaviz ★ 1.5k

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1.4k

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rtracklayer bigwig import

updated 8.5 years ago by Michael Lawrence ★ 11k • written 8.5 years ago by zx8754 ▴ 10

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1.7k

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bigwig rtracklayer export.bw

updated 8.5 years ago by Michael Lawrence ★ 11k • written 8.5 years ago by story.benjamin ▴ 20

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2.8k

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rtracklayer bigwig

updated 9.2 years ago by laurent.lacroix ▴ 30 • written 9.3 years ago by koneill ▴ 30

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1.4k

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rtracklayer BigWig

updated 9.4 years ago by Michael Lawrence ★ 11k • written 9.4 years ago by dborgesrmit • 0

10 results • Page 1 of 1

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Comment: Module membership vs gene significance result and Modules-trait relationships re by Vinaya • 0

Hi. I am having the same issue, and haven't found a solution still.

Comment: Feature Counts - potential bug with outfile.jcounts by Tom • 0

[Penistone Locksmith][1] I think that would be a great idea; a novel junction to annotated junction proximity output column. So if the nove…

Comment: Filtering after DESeq by caroline.zanchi • 0

I am going to try this right now, thanks !

Comment: Bioconductor 3.20 Release Schedule by randyprice13102000 • 0

This offers much info https://bioconductor.org/checkResults/release/bioc-LATEST/

Comment: Filtering after DESeq by ATpoint ★ 4.8k

The problem is that your prefilter is not group-aware so the behaviour of seeing these sorts of outliers is expected. This is why I always …

Votes

A: Minfi issue: return code from pthread_create() is 22

Comment: Filtering after DESeq

Answer: DiffBind; Error: No sites have activity greater than filter value

DiffBind; Error: No sites have activity greater than filter value

remove X and Y chromosome genes in RNA-seq data using DESeq2 pipeline

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