Bioconductor BigWig

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1.9k

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DESeq2 edgeR bigwig limma

2.2 years ago • updated 23 months ago Bogdan ▴ 670

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2.1k

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bedgraph wiggleplotr bigwig wig

updated 2.3 years ago by complaintguide • 0 • written 2.3 years ago by Bogdan ▴ 670

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1.7k

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bigWig RNASeqData

2.9 years ago bas_work ▴ 30

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2.1k

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software error BigWig import windows

4.7 years ago lsilva.m • 0

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2.1k

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wiggleplotr bigwig coverage ngs

updated 7.2 years ago by kaur.alasoo ▴ 30 • written 7.2 years ago by borgmichael • 0

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3.4k

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bigwig rtracklayer import granges grangeslist

updated 7.4 years ago by Michael Lawrence ★ 11k • written 7.4 years ago by Assa Yeroslaviz ★ 1.5k

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1.3k

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rtracklayer bigwig import

updated 8.1 years ago by Michael Lawrence ★ 11k • written 8.1 years ago by zx8754 ▴ 10

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1.6k

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bigwig rtracklayer export.bw

updated 8.1 years ago by Michael Lawrence ★ 11k • written 8.1 years ago by story.benjamin ▴ 20

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2.6k

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rtracklayer bigwig

updated 8.9 years ago by laurent.lacroix ▴ 30 • written 8.9 years ago by koneill ▴ 30

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1.4k

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rtracklayer BigWig

updated 9.1 years ago by Michael Lawrence ★ 11k • written 9.1 years ago by dborgesrmit • 0

10 results • Page 1 of 1

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Comment: Easiest way to convert read10xMolInfo data into a dataframe in R with gene label by daldabrown9 • 0

For more info visit us on [R350 status check][1] [1]: https://sassagrantstatuscheck.co.za/

Answer: Margins for gene_set_enrichment_plot by Leonardo Collado Torres ★ 1.1k

Hi, In version 1.19.4 of `spatialLIBD` @lahuuki re-implemented the `gene_set_enrichment_plot()` function using `ComplexHeatmap::Heatmap(…

Comment: miRTarRnaseq library by mercedeh.movassagh ▴ 20

Maria please read the mirTarRnaSeq paper. In particular, Supplemental Table 2, clarifies all the statistical models, inputs and outputs. If…

Comment: Help using rtracklayer for gene ID extraction by James W. MacDonald 67k

Telling me you can't do something without showing what you tried is not helpful. When posting here, try to put yourself in the shoes of peo…

Comment: miRTarRnaseq library by María Calvo • 0

Hello Mercedeh, excuse me for not explaining it adecuately, Im using the "Part3 - Identify significant miRNA mRNA relationships for 2 time …

Votes

Whether to build DESeq2 model with all data and then contrast groups or subset groups first, build model and then contrast?

Answer: Feature Counts - potential bug with outfile.jcounts

Answer: Pre-filtering TPM kallisto for ssGSEA / DESeq2

Answer: Mapping Between GenBank ID's and Uniprot

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