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News: Win 1 of 50 free virtual registrations to BioC Asia 2022 (Dec 1-2, 2022)
Asia BioCAsia Conferences Events BioC
written 3.0 years ago by ▴ 760
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can't update bioconductor 3.18
BioCor bioc BiocVersion
2.1 years ago feifan • 0
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JAVA_HOME cannot be determined on Windows on Bioconductor platform report
bioc Bioconductor
updated 4.1 years ago by 16k • written 4.1 years ago by ▴ 20
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Multiple R versions
R bioc
updated 6.7 years ago by 25k • written 6.7 years ago by • 0
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BioC happening in 2018?
BioC 2018 Course
8.3 years ago s.munster ▴ 40
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Errors installing RforProteomics
Bioc package installation rforproteomics
updated 9.7 years ago by 1.6k • written 9.7 years ago by • 0
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Comment: Bioconductor 3.22 Release Schedule by loganlstevens • 0
This release reminds me of the strategies in [solitaired](https://solitaired.io) to overcome live solitaires.
Answer: Create consensusMatrix for codon bases by Kevin Blighe ★ 4.0k
To address your query on generating a codon frequency matrix analogous to the output from `consensusMatrix` for a `DNAStringSet` object, no…
Answer: Finding duplicated entries in GRangesList by Kevin Blighe ★ 4.0k
The duplicated and unique functions operate element-wise on GRangesList objects. This means that they apply the respective function to each…
Answer: sigDF object in sesame by Kevin Blighe ★ 4.0k
Your interpretation of the column headers in the SigDF object is correct: MG corresponds to the methylated signal intensity in the green ch…
Answer: DESeq2 on non-RNASeq counts data by Kevin Blighe ★ 4.0k
The use of DESeq2 for count data from artificial sequences is acceptable, as the program models counts via a negative binomial distribution…
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Answer: Post translational modifications and phosphoproteomics in limpa?
Answer: Post translational modifications and phosphoproteomics in limpa?
Answer: Identifying differentially expressed genes in individual samples from a large co
Answer: Identifying differentially expressed genes in individual samples from a large co
Bioconductor Seminar Series - Dec 2: Deep-learning Gene Perturbation Effect Prediction
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