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biocversion
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1
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9
replies
1.5k
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Why is OrgDb linked to specific biocversion? / How to analyze old datasets?
BiocVersion
OrgDb
clusterProfiler
17 months ago
MK
• 0
6
votes
9
replies
2.3k
views
Install Bioconductor 3.7
docker
BiocManager
BiocVersion
updated 5.0 years ago by
Martin Morgan
25k • written 5.0 years ago by
Michael Steinbaugh
▴ 90
0
votes
5
replies
1.2k
views
Trouble with DESeqDataSetFromMatrix
BiocVersion
updated 2.7 years ago by
shepherl
3.8k • written 2.7 years ago by
J
• 0
1
vote
3
replies
926
views
Why is Bioconductor telling me to add an unreleased dependency of R 4.1 in my package ?
versions
BiocVersion
dependencies
updated 3.1 years ago by
shepherl
3.8k • written 3.1 years ago by
sohitmiglani
• 0
0
votes
2
replies
460
views
can't update bioconductor 3.18
BioCor
bioc
BiocVersion
6 months ago
feifan
• 0
0
votes
2
replies
288
views
Can't download Bioconductor
BiocVersion
updated 4 months ago by
ATpoint
★ 4.0k • written 4 months ago by
paul.lempka02
• 0
0
votes
2
replies
1.2k
views
Install older version of DESeq2 for use on cluster with older version of R
DESeq2
BiocVersion
updated 2.8 years ago by
glennmaxwell229
• 0 • written 2.8 years ago by
Daisy
• 0
4
votes
1
reply
2.2k
views
News:
Join the Bioconductor Community Advisory Board
bioconductoroversight
community
BiocVersion
news
updated 3.2 years ago by
aedin
• 0 • written 3.2 years ago by
Matthew Ritchie
▴ 1000
1
vote
1
reply
548
views
Deploying to shinyapps.io returns error for BiocVersion and phangorn packages
BiocVersion
phangorn
ShinyApps
updated 5 months ago by
James W. MacDonald
65k • written 5 months ago by
susan
• 0
1
vote
1
reply
4.9k
views
package ‘destiny’ is not available for Bioconductor version '3.13'
destiny
BiocVersion
updated 2.8 years ago by
shepherl
3.8k • written 2.8 years ago by
Yiming
▴ 10
0
votes
0
replies
756
views
Job:
Job: Product-focused Bioinformatician
massgeek
Reactome
Proteomics
STRINGdb
3.4 years ago
paula
• 0
2
votes
0
replies
873
views
News:
New Bioconductor Community Advisory Board Members for 2021
bioconductoroversight
news
community
BiocVersion
3.1 years ago
Matthew Ritchie
▴ 1000
12 results • Page
1 of 1
Recent ...
Replies
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
by
winwater0928
• 0
Thank you for your comment! I'll review my code from top to bottom.
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
So basically you are using HTML markup to set your subscripts and whatnot, and then `element_markdown` does the rest.
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
Oh snap. Foiled again. Here it is with spaces & ge ; and & lt ;
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
Oh LOL. My markdown got edited by the markdown editor! What is between the p and 50 in the first case is the HTML for greater than or equal…
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
Ah, good point. You could instead try ``` > library(ggtext) > keyvals.shape = c(rep(3,10), rep(2,8)) > names(keyvals.shape) = ifelse(keyva…
Votes
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
biomaRt error: database disk image is malformed
Comment: biomaRt : No lock file for BiocFileCache
Answer: Cross-species analysis - how to compute the mid parent value?
Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
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