Bioconductor Build/check error

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package development r package problem build/check error mmappr2

7.1 years ago Kyle Johnsen ▴ 30

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package build build/check error check release News

7.6 years ago shepherl 4.2k

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bioccheck build/check error

updated 8.6 years ago by Martin Morgan 25k • written 8.6 years ago by ihnatova • 0

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biocstyle vignettes build/check error latex

updated 8.9 years ago by Andrzej Oleś ▴ 750 • written 8.9 years ago by Mattia ▴ 10

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2.3k

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build/check error

updated 10.0 years ago by brian.long ▴ 10 • written 10.0 years ago by thucmi • 0

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Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication? by Ahmed Salah • 0

Thank you very much, @ATpoint and @kevin , for your valuable insights. I have carefully checked all your suggestions. First, I examined th…

Answer: Finding duplicated entries in GRangesList by Kevin Blighe ★ 4.0k

The duplicated and unique functions operate element-wise on GRangesList objects. This means that they apply the respective function to each…

Answer: DESeq2 on non-RNASeq counts data by Kevin Blighe ★ 4.0k

The use of DESeq2 for count data from artificial sequences is acceptable, as the program models counts via a negative binomial distribution…

Answer: After running samtools, the featureCounts command crashed. by Kevin Blighe ★ 4.0k

Hello Rui Tang, The buffer overflow error in featureCounts that you encountered is likely due to a compatibility issue between the Subre…

Answer: Problem with the TMB plot by Kevin Blighe ★ 4.0k

The issue that you describe with the tumor mutational burden (TMB) plots appearing linear and lacking consistent TMB values across samples …

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Answer: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Answer: Post translational modifications and phosphoproteomics in limpa?

Answer: Identifying differentially expressed genes in individual samples from a large co

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