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chimera
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Problem with prettyPrint (Chimera)
prettyPrint
Chimera
updated 7.7 years ago by
mrp
• 0 • written 8.0 years ago by
anders
• 0
1
vote
4
replies
2.0k
views
chimera error after update to R 3.2
chimera
IRanges
updated 9.3 years ago by
raffaele calogero
▴ 500 • written 9.7 years ago by
kelly.rabionet
▴ 10
0
votes
5
replies
3.3k
views
Problem Importing STAR fusion data into chimera
fusion genes
chimera
star
updated 10.0 years ago by
richa_r
• 0 • written 10.4 years ago by
am26
• 0
1
vote
5
replies
2.7k
views
Single end STAR Chimeric.out.junction fails to read with chimera::importFusionData
chimera
STAR
updated 10.1 years ago by
rcaloger
▴ 500 • written 10.1 years ago by
wresch
• 0
0
votes
0
replies
2.0k
views
News:
RNAseq data analysis courses: Torino (Italy) : Beginner course March 17-19 2015 & Advance Course April 14-16 2015
rnaseq
mirna
onechannelgui
chimera
News
10.2 years ago
raffaele calogero
▴ 500
0
votes
1
reply
2.1k
views
molecular viz tools (eg, PyMol) and R?
chimera
chimera
updated 16.6 years ago by
Thomas Girke
★ 1.7k • written 16.6 years ago by
Paul Shannon
★ 1.1k
6 results • Page
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Comment: Error in retrieving clinical data
by
silickas
• 0
Thank you for the reply. I will try to do that next time. This time instead, I used the GenomicDataCommons package to download clinical dat…
Comment: deseq2 lfc shrinkage with few DEGs
by
Robert
• 0
I'm dealing with a similar situation. I assume the coefficients related to batch effect would need to be included in idx also, is this corr…
Comment: [ChIP-seq] DESeq2 on counts matrix from union set of called peaks
by
Luca
• 0
Thank you so much!! Yeah I had thought about this too, regarding the fact that DiffBind is a wrapper for counting peaks in this way in R di…
Comment: DESeq2 testing ratio of ratios (RIP-Seq, CLIP-Seq, ribosomal profiling)
by
aitor
• 0
Hi everyone. I have a RIP-Seq analysis with 3 conditions and 3 assays (IP, IgG and Input for each of them). 4 replicates for each conditio…
Comment: Discrepancy between Excel TPP-TR reported values and the Melt Curve reported val
by
James W. MacDonald
68k
You will need to provide a self-contained example, or it is unlikely that anybody could debug any possible issue.
Votes
Answer: Limma - Complex 2-way multi-level contrast with paired samples
Answer: [ChIP-seq] DESeq2 on counts matrix from union set of called peaks
Help with creation of an OrgDB package and conduction of a bioinformatical analysis of gene expression
Answer: Loading Ensembl 98 EnsDb from Annotation Hub fails with database disk image malf
Answer: Differential expression of proteins using somascan data
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