Bioconductor Chimera

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prettyPrint Chimera

updated 7.7 years ago by mrp • 0 • written 8.0 years ago by anders • 0

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chimera IRanges

updated 9.3 years ago by raffaele calogero ▴ 500 • written 9.7 years ago by kelly.rabionet ▴ 10

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fusion genes chimera star

updated 10.0 years ago by richa_r • 0 • written 10.3 years ago by am26 • 0

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2.7k

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chimera STAR

updated 10.1 years ago by rcaloger ▴ 500 • written 10.1 years ago by wresch • 0

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rnaseq mirna onechannelgui chimera News

10.2 years ago raffaele calogero ▴ 500

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2.1k

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chimera chimera

updated 16.6 years ago by Thomas Girke ★ 1.7k • written 16.6 years ago by Paul Shannon ★ 1.1k

6 results • Page 1 of 1

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Comment: sesameDataCache is not work properly on my system by Samreen • 0

Any luck with this? I have tried all of the above and it still doesn't work. This is my session info and I'm on a cluster computing environ…

Answer: Using tximport for kallisto aligned TOIL data by James W. MacDonald 68k

If you just have the transcript data, you probably don't need (and maybe cannot use) `tximport`. Instead you could just do the naive thing …

Answer: Reading gene expression data in GPR format and converting it to xlsx format by James W. MacDonald 68k

Setting aside the inadvisability of putting these data into Excel (and I should point out that these data are not single-cell, but instead …

Comment: concentration tables suitable as input for new packages? by wilkinson • 0

I am grateful for your response. Software such as "Spectra" may parse MS-data to generate tables of concentrations, for instance. But inste…

Comment: Removing UTR from GTF for gene quantification by ATpoint ★ 4.7k

Consider asking at biostars or bioinformatics reddit, since this is not directly related to a Bioconductor problem. Anyway, a couple of th…

Votes

Answer: Differential expression of proteins using somascan data

Answer: Surprising behavior for DEXseq dispersion estimate plot?

Answer: Handle zero effective gene length when tximport RSEM results

Handle zero effective gene length when tximport RSEM results

How to remove genes with 0 counts in tximport?

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