Bioconductor Chromosome

Showing : chromosome • reset

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1.5k

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gene chromosome proteincodinggene

2.5 years ago Liliian • 0

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2.8k

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GenomicRanges split chromosome TxDb

updated 3.8 years ago by Hervé Pagès 16k • written 3.8 years ago by jon.klonowski ▴ 40

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16k

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SNP rs id Biomart Chromosome coordinates

updated 2.2 years ago by James W. MacDonald 68k • written 5.2 years ago by Mahan • 0

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1.1k

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Chromosome Annotation

updated 5.2 years ago by James W. MacDonald 68k • written 5.2 years ago by Bine ▴ 50

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1.2k

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tximport GCF feature table parsing error chromosome

updated 5.5 years ago by Michael Love 43k • written 5.5 years ago by knholm • 0

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849

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RefSeq Chromosome Mutalyzer

5.5 years ago heiko_kin ▴ 60

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757

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edgeR chromosome RNAseq

updated 5.5 years ago by swbarnes2 ★ 1.4k • written 5.5 years ago by missmoparker • 0

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1.1k

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homo sapiens chromosome

updated 7.4 years ago by James W. MacDonald 68k • written 7.4 years ago by xchen8 • 0

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2.9k

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bsgenome chromosome reference genome

updated 7.6 years ago by Hervé Pagès 16k • written 7.6 years ago by Nathan Sheffield ▴ 10

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3.2k

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Gviz chromosome ideogram

updated 8.6 years ago by bernatgel ▴ 150 • written 8.6 years ago by dulunar ▴ 10

10 results • Page 1 of 1

Recent ...

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Comment: Help with defining groups by Phinney, Brett ▴ 10

I got it working , thank you!!!

Comment: Check removeBatchEffect effectiveness by massimo • 0

I would kindly ask for additional support. When not including the design_timepoint argument in removeBatchEffect and thus keeping the inter…

Comment: Error Loading Experiment from SimBenchData Package by ksankaran • 0

Aha, that was it! The object was class Seurat, but I didn't have it installed. After installing, everything works as expected.

Comment: Streamlining the computing time for MiloDE p-value correction in large dataset? by ATpoint ★ 5.0k

Is a method that is so computationally expensive really beneficial and necessary? You seem to have biological replication, don't you, so ps…

Answer: NA values for DESeq2 p-values and adjusted p-values using large sample sizes by ATpoint ★ 5.0k

Outliers without replacement, independent filtering or all-zero counts for that gene. That's the three options that trigger NAs https://bio…

Votes

Comment: Check removeBatchEffect effectiveness

Gene expression associated with continuous (quantitative) traits (Limma/edgeR/correlation)

Answer: Error Loading Experiment from SimBenchData Package

Comment: incomplete imputation of missing values with LEA impute() function

Answer: Expected memory usage for analyzing large single-cell seq datasets (> 450,000 ce

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