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cytof
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0
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1.1k
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flow cytometry differential expression through time
cytofWorkflow
cytof
diffcyt
4.9 years ago
achaillon
• 0
0
votes
0
replies
1.9k
views
Error from FlowSom to Cytofast
Cytofast
FlowSom
CyTOF
fcs files
5.1 years ago
domenico.somma
• 0
1
vote
5
replies
1.6k
views
CyTOF Differential Abundance Analysis using DESeq2
deseq2
mass cytometry
CyTOF
updated 5.1 years ago by
Michael Love
43k • written 5.1 years ago by
mikhael.manurung
▴ 280
0
votes
0
replies
947
views
Concatenating different runs from the same pool of barcoded CyTOF samples
batch effect
cytof
5.6 years ago
mikhael.manurung
▴ 280
1
vote
6
replies
2.4k
views
Re: Cydar. Can I Normalize CyTOF data with just one FCS file/batch and if so, which normalization mode is recommended?
Cydar
CyTOF
normalization
updated 6.1 years ago by
Aaron Lun
★ 29k • written 6.1 years ago by
ghogg
• 0
2
votes
4
replies
1.5k
views
Cydar's countCells tolerance parameter for arcsinh-transformed data
cydar
CyTOF
updated 6.7 years ago by
Aaron Lun
★ 29k • written 6.7 years ago by
mikhael.manurung
▴ 280
2
votes
2
replies
1.7k
views
Cytofkit - Trouble with writing files after performing the analysis
cytofkit
cytof
write.csv
output
updated 9.0 years ago by
chen_hao
▴ 30 • written 9.0 years ago by
cjackson13
• 0
1
vote
2
replies
3.2k
views
Errors when reading CyToF flowSet into flowCore
flowCore
flowcore
CyToF
Rtsne
updated 10.2 years ago by
Jiang, Mike
★ 1.3k • written 10.2 years ago by
clevy
▴ 10
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Comment: "Watched Tags" are being erased rather than updated
by
dipakosikotes
• 0
Possibly a combination: some change in the forum software that affects some accounts/configurations but not all [unblocked games][1] […
Answer: EuroBioC2023 abstract submission is open!
by
Hao
• 0
It's obvious that the blogger hought on details. It is not only easy to read but also makes the content more rich and interesting.[1v1 …
Comment: "Watched Tags" are being erased rather than updated
by
shepherl
4.2k
I can reproduce this and have opened an issue on the code base https://github.com/Bioconductor/support.bioconductor.org/issues/112
Comment: "Watched Tags" are being erased rather than updated
by
shepherl
4.2k
we can investigate this issue. thank you for bringing it to our attention
Comment: deseq2 filter the low counts
by
Michael Love
43k
> But within each comparison (contrast), if I trace some DEGs back to the original salmon merged gene counts (or even to normalised counts)…
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Bioconductor 3.22 Released!
Bioconductor 3.22 Released!
Comment: "Watched Tags" are being erased rather than updated
Comment: deseq2 filter the low counts
Answer: DESeq2 interactions
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