Bioconductor Cytof

Showing : cytof • reset

votes

replies

1.2k

views

cytofWorkflow cytof diffcyt

5.0 years ago achaillon • 0

votes

replies

1.9k

views

Cytofast FlowSom CyTOF fcs files

5.2 years ago domenico.somma • 0

vote

replies

1.6k

views

deseq2 mass cytometry CyTOF

updated 5.2 years ago by Michael Love 43k • written 5.3 years ago by mikhael.manurung ▴ 280

votes

replies

1.0k

views

batch effect cytof

5.8 years ago mikhael.manurung ▴ 280

vote

replies

2.5k

views

Cydar CyTOF normalization

updated 6.3 years ago by Aaron Lun ★ 29k • written 6.3 years ago by ghogg • 0

votes

replies

1.5k

views

cydar CyTOF

updated 6.9 years ago by Aaron Lun ★ 29k • written 6.9 years ago by mikhael.manurung ▴ 280

votes

replies

1.8k

views

cytofkit cytof write.csv output

updated 9.2 years ago by chen_hao ▴ 30 • written 9.2 years ago by cjackson13 • 0

vote

replies

3.2k

views

flowCore flowcore CyToF Rtsne

updated 10.4 years ago by Jiang, Mike ★ 1.3k • written 10.4 years ago by clevy ▴ 10

8 results • Page 1 of 1

Recent ...

Replies

Comment: Limma-voom sample weights and impact on DEG numbers by A.Barden ▴ 20

Apologies for the late response - thank you for this information, it is very helpful.

Comment: Converting Probe IDs to HGNC symbols by Manav ▴ 10

ah thank u so much

Comment: Guitar R package requires update due to dependency GenomicFeatures by Sean Davis 21k

A great way to communicate such a nice troubleshooting and bug fix hint is to file an issue in github: https://github.com/lzcyzm/Guitar/iss…

Answer: Converting Probe IDs to HGNC symbols by Sean Davis 21k

The brainarray annotations are very confusing, as the IDs in the fData look like affymetrix probe IDs. To clarify, the brainarray project m…

Comment: How to do differential expresion across time serise with edgeR? by Gordon Smyth 53k

If you have fake replicates, then I think my code answers your question about how to run the edgeR time-course analysis. Regarding tutoria…

Votes

Answer: Limma-voom sample weights and impact on DEG numbers

Answer: Converting Probe IDs to HGNC symbols

Converting Probe IDs to HGNC symbols

Answer: How to install packages such as TCGAbiolinks, SumarizedExperiment?

Awards • All