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data.frame
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2
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581
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'Killed' error during RNAseq alignment
subjunc
data.frame
myExons
Rsubread
updated 10 months ago by
ATpoint
★ 4.1k • written 10 months ago by
Sukeerthi
• 0
0
votes
1
reply
609
views
?? Any R script for subtracting multiple controls from multiple patients in data.frame and assign 1 if output is less than 0
Rscript
data.frame
forloop
R
3.8 years ago
Ankit
▴ 20
1
vote
1
reply
1.3k
views
TCGA isoform expression quantification file - how to reshape data
data.frame
tcga
reshape data
updated 5.0 years ago by
Steve Lianoglou
★ 13k • written 5.0 years ago by
mario.zanfardino
▴ 160
0
votes
1
reply
734
views
Error in data.frame for limmaCtData function
software error
limma
data.frame
updated 5.6 years ago by
Gordon Smyth
50k • written 5.6 years ago by
azmir004
• 0
0
votes
1
reply
981
views
Workflow Perraudeau F1000 - Bioconductor workflow for scRNA-seq
data.frame
read.table
updated 6.1 years ago by
davide risso
▴ 950 • written 6.1 years ago by
viviana.marin-esteban
• 0
0
votes
0
replies
992
views
NOISeq: Need help with my data frame
R
noiseq
data.frame
6.3 years ago
aokoro
• 0
3
votes
2
replies
1.6k
views
AnnotationHub: A RPKM data.frame of Epigenomics RoadMap Project seems strange
annotationhub
roadmap project
rpkm
data.frame
7.6 years ago • updated 7.5 years ago
wcstcyx
▴ 30
0
votes
1
reply
1.1k
views
plotBed R data frame - last line plotted with line 1
sushi
plotBed
data.frame
8.0 years ago
waqasnayab
• 0
6
votes
3
replies
3.3k
views
How to transform cytometry data from CSV and not FCS file?
flowcore
transform
data.frame
updated 8.1 years ago by
Jiang, Mike
★ 1.3k • written 8.1 years ago by
Julia
▴ 20
3
votes
3
replies
1.4k
views
Sorting data frame derived from GRanges
granges
data.frame
sort
updated 8.5 years ago by
Michael Lawrence
★ 11k • written 8.5 years ago by
igor
▴ 40
2
votes
2
replies
872
views
Error when add `in` column into data.frame
data.frame
updated 8.6 years ago by
Ryan C. Thompson
★ 7.9k • written 8.6 years ago by
qiuworld.ou
• 0
2
votes
6
replies
1.7k
views
edgeR output error and data frame setting
EdgeR
data.frame
glmLRT
updated 8.7 years ago by
Gordon Smyth
50k • written 8.7 years ago by
amoltej
▴ 10
12 results • Page
1 of 1
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Comment: Once again a "Model matrix not full rank"
by
arfranco
▴ 130
But.. How to run a temporal assay?
Comment: Deseq2 and Normalization of RNA sequencing data
by
kcarey
• 0
Noise in terms of expression...to make sure that the information reported is not due to artifacts and actually expression. When I had FPKM …
Answer: NEED FOR NESSASORY HELP
by
Gordon Smyth
50k
Is this quesion related to your earlier question? https://support.bioconductor.org/p/9157127/ If you've already done an edgeR analysis, yo…
Answer: Gene-by-sample covariates in limma
by
Gordon Smyth
50k
Your first method would be valid if, instead of taking ratios, you instead used the differences between the log-transformed 13C and 12C int…
Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-
by
Gordon Smyth
50k
You have discovered something that I have pointed out many times on this forum. fgsea does not implement the classic GSEA method published …
Votes
Bioconductor 3.19 is Released!
A: Error in DESeqDataSet : some values in assay are not integers
Bioconductor 3.19 is Released!
Bioconductor 3.19 is Released!
Answer: DEseq2 coefficient
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