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News: New Package Submission Deadline for Bioc Release 3.14
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4.3 years ago shepherl 4.3k
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News: Bioconductor 3.13 New Package Submission Deadline
release Submission newpackage Release Deadline
4.8 years ago • updated 4.7 years ago shepherl 4.3k
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News: Bioconductor Release 3.12 and Bioconductor Devel 3.13 Code Freeze Deadlines!
Bioconductor release devel deadline
4.8 years ago • updated 4.7 years ago shepherl 4.3k
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News: New Package Submission Deadline for Bioc Release 3.12
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5.3 years ago shepherl 4.3k
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News: Bioc2020 - Call for BOF/HAK/FAQ Sections
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5.8 years ago • updated 5.6 years ago shepherl 4.3k
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News: Import Deadlines for RELEASE 3.11
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5.7 years ago shepherl 4.3k
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News: Last Day to Submit New Packages for Bioconductor Release 3.11
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5.8 years ago shepherl 4.3k
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News: New Package and New Docker Image Submission Deadline for Bioc Release 3.11
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5.8 years ago shepherl 4.3k
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News: Bioconductor Release 3.10 Code Freeze Deadline
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5.8 years ago shepherl 4.3k
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News: Bioc2020 - Deadline for workshops/talk/poster proposals TODAY!
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5.9 years ago shepherl 4.3k
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News: Important Deadlines for RELEASE
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updated 6.2 years ago by 25k • written 6.2 years ago by 4.3k
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News: Bioconductor 3.10 db0s are available
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6.3 years ago kayla.interdonato ▴ 160
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News: Deadline for commits to current Release 3.9 Branch
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6.3 years ago shepherl 4.3k
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News: Package Submission Deadline is TODAY!!
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6.3 years ago shepherl 4.3k
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News: Deadline for commits to current Release 3.9 Branch and Devel 3.10
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6.3 years ago shepherl 4.3k
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News: New Package Submission Deadline for Bioc Release 3.10
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6.3 years ago shepherl 4.3k
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News: Deadline for devel branch 3.9 to pass R CMD build and R CMD check
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6.8 years ago shepherl 4.3k
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News: Package Submission Deadline is TODAY!!
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6.8 years ago shepherl 4.3k
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News: Deadline for commits to current Release 3.8 Branch
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6.8 years ago shepherl 4.3k
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News: New Package Submission Deadline for Bioc Release 3.9
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6.8 years ago shepherl 4.3k
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News: Package Submission Deadline is TODAY!!
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7.3 years ago shepherl 4.3k
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News: Deadline for devel branch 3.8 to pass R CMD build and R CMD check
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7.3 years ago shepherl 4.3k
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News: Deadline for commits to current Release 3.7 Branch
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7.3 years ago shepherl 4.3k
23 results • Page 1 of 1
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Answer: When to use edgeR or limma by Gordon Smyth 53k
The short answer is that we generally prefer edgeR for applications with lots of small counts and limma for complex designs with random eff…
Comment: limpa-blank normalization and Spectronaut's PTM stoichiometry by Gordon Smyth 53k
I updated the above answer today.
Answer: When to use edgeR or limma by James W. MacDonald 68k
I would use edgeR's quasi-likelihood model for any analysis with a smaller number of observations (like 3 vs 3 or similar), but if you have…
Answer: limpa-blank normalization and Spectronaut's PTM stoichiometry by Gordon Smyth 53k
The short answer is that limpa reads standard feature-level intensities from Spectronaut or other quantifications tools. limpa is designed …
Comment: Question about the filterByExpr function inputs in edgeR by mohammedtoufiq91 ▴ 10
@gordonsmyth Noted, thank you very much.
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Answer: When to use edgeR or limma
Answer: When to use edgeR or limma
Answer: When to use edgeR or limma
Answer: When to use edgeR or limma
A: deseq2 - paired samples in 2 sequencing types with very different library sizes
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