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dna
•
reset
0
votes
2
replies
488
views
find tandem repeats in DNA
DNA
repeats
15 months ago
me-nobody
• 0
0
votes
1
reply
767
views
TFBSTools and readFASTA
TFBSTools
DNASeqData
readFASTA
DNA
RStudio
updated 2.5 years ago by
James W. MacDonald
65k • written 2.5 years ago by
HELEN
• 0
1
vote
1
reply
1.1k
views
How to use ENCprime via coRdon with a custom background sequence set?
software
codon
usage
bias
dna
updated 4.4 years ago by
anamaria
▴ 10 • written 4.4 years ago by
jol.espinoz
▴ 40
0
votes
1
reply
600
views
what do these DNA alphabet means ? "-", "+", "."
DNA
alphabet
updated 5.2 years ago by
James W. MacDonald
65k • written 5.2 years ago by
fjia304
• 0
2
votes
3
replies
1.8k
views
Is it possible to import a multiple fasta alignemnt (.mfa) file into DECIPHER?
decipher
DNA
biostrings
updated 6.4 years ago by
Erik Wright
▴ 150 • written 6.4 years ago by
reubenmcgregor88
• 0
0
votes
5
replies
2.5k
views
How to prevent readDNAStringSet() function from switching masked sequences (lowercase) to uppercase sequence?
biostrings
mask
repeatmasker
DNA
updated 3.3 years ago by
ivantsers
• 0 • written 6.5 years ago by
beausoleilmo
• 0
0
votes
1
reply
1.4k
views
ABI HRM data analysis
ABI
sequence
DNA
melting
curve
updated 8.9 years ago by
Hervé Pagès
16k • written 8.9 years ago by
Prasanth
▴ 20
7 results • Page
1 of 1
Recent ...
Replies
Comment: Once again a "Model matrix not full rank"
by
James W. MacDonald
65k
You already ran a temporal assay. Now you can compare each time point to the baseline. The interaction term is only applicable if you have…
Comment: Timecourse RNASeq analysis
by
Aurora
• 0
I managed to run ImpulseDE2 as I am interested in getting significant gene changes over time. Now I would like to run deseq as well and com…
Comment: Once again a "Model matrix not full rank"
by
arfranco
▴ 130
But.. How to run a temporal assay?
Comment: Deseq2 and Normalization of RNA sequencing data
by
kcarey
• 0
Noise in terms of expression...to make sure that the information reported is not due to artifacts and actually expression. When I had FPKM …
Answer: NEED FOR NESSASORY HELP
by
Gordon Smyth
50k
Is this quesion related to your earlier question? https://support.bioconductor.org/p/9157127/ If you've already done an edgeR analysis, yo…
Votes
Bioconductor 3.19 is Released!
A: Error in DESeqDataSet : some values in assay are not integers
Bioconductor 3.19 is Released!
Bioconductor 3.19 is Released!
Answer: DEseq2 coefficient
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