Showing : software • reset
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140
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Job: Research software engineer at UPF Barcelona
JobPosting Devel GSVA Software
10 weeks ago Robert Castelo ★ 3.0k
1
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0
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146
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News: Bioconductor 3.16 is Released!
Release Packages Bioconductor Software
3 months ago shepherl 3.4k
0
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0
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202
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News: New Package Submission Deadline Tomorrow for Bioconductor 3.16
Release Devel Bioconductor Software
4 months ago shepherl 3.4k
8
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0
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315
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News: Bioconductor 3.15 is Released!
Software Release Packages Bioconductor
9 months ago shepherl 3.4k
0
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0
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241
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News: New Package Submission Deadline Tomorrow for Bioconductor 3.15
Release Software Bioconductor Devel
10 months ago shepherl 3.4k
0
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5
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672
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News: Final List of Deprecated Packages for Bioc3.14
ExperimentData Deprecation Software Release Workflow
16 months ago • updated 9 months ago shepherl 3.4k
8
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0
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429
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News: Bioconductor 3.14 is Released!
release Packages Software Release Bioconductor
15 months ago shepherl 3.4k
0
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0
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431
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Job: Hiring Bioinformaticians, Data Engineers, & Computer Scientists @ Flagship Labs 77
data immunology software vaccinology
17 months ago Daniel • 0
5
votes
0
replies
543
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News: Bioconductor 3.13 is Released!
Release Bioconductor Packages Software
20 months ago shepherl 3.4k
2
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2
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1.0k
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News: Final List of Deprecated Packages for Bioc3.13
Workflow Software ExperimentData Deprecation
2.2 years ago • updated 21 months ago shepherl 3.4k
4
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0
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467
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News: Bioconductor 3.12 is Released!
Software release Bioconductor Packages Release
2.3 years ago shepherl 3.4k
1
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2
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884
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News: Final List of Deprecated Packages for Bioc3.12
annotation software experimentdata deprecated News
2.3 years ago shepherl 3.4k
0
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0
replies
712
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Job: R programmer position in genetic epidemiology/bioconductor
genetics genomics software Job
2.3 years ago Vincent J. Carey, Jr. 6.6k
2
votes
4
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704
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Bioconductor package development
package R software development
updated 2.4 years ago by 25k • written 2.4 years ago by • 0
3
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0
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980
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News: List of Deprecated Packages for Bioc3.12
annotation software experiment data deprecated News
2.4 years ago shepherl 3.4k
0
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2
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416
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What is Software, Annotationdata, Experimentdata and workflow category?
Software annotation experiment workflow
updated 2.5 years ago by 3.4k • written 2.5 years ago by • 0
0
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0
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401
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News: List of Deprecated Packages for Bioc3.12
deprecated experiment data software annotation News
2.7 years ago shepherl 3.4k
0
votes
2
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417
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Problem in dowloading "TxDb.Hsapiens.UCSC.hg38.knownGene"
annotation software TxDb
updated 2.7 years ago by 62k • written 2.7 years ago by • 0
0
votes
3
replies
561
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News: Final List of Deprecated Packages for Bioc3.11
software annotation experiment data deprecated News
updated 2.8 years ago by 140 • written 2.9 years ago by 3.4k
4
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0
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432
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News: Bioconductor 3.11 is Released!
software bioconductor release packages News
2.8 years ago shepherl 3.4k
0
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0
replies
381
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News: List of Deprecated Packages Bioc 3.11
annotation experimentdata software release deprecation News
2.9 years ago shepherl 3.4k
0
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1
reply
449
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News: List of Deprecated Packages Bioc 3.11
annotation experimentdata software release deprecation News
3.1 years ago shepherl 3.4k
1
vote
1
reply
574
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How to use ENCprime via coRdon with a custom background sequence set?
software codon usage bias dna
updated 3.2 years ago by ▴ 10 • written 3.2 years ago by ▴ 40
0
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0
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461
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News: List of Deprecated Packages Bioc 3.11
annotation experimentdata software release deprecation News
3.2 years ago shepherl 3.4k
0
votes
2
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837
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News: Final List of Deprecated Packages for Bioc3.10
annotation experimentdata deprecation release software News
3.3 years ago • updated 3.2 years ago shepherl 3.4k
2
votes
2
replies
563
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News: Bioconductor Devel 3.11 Notification
software bioconductor packages reports News
3.3 years ago shepherl 3.4k
6
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0
replies
493
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News: Bioconductor 3.10 is released!!
release software packages bioconductor News
3.3 years ago shepherl 3.4k
0
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0
replies
486
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News: List of Deprecated Packages Bioc 3.10
annotation experimentdata software release deprecation News
3.4 years ago shepherl 3.4k
2
votes
0
replies
1.9k
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Job: Bioconductor infrastructure for the integration of genomics, transcriptomics and proteomics data
proteomics genomics transcriptomics software Job
3.4 years ago Laurent Gatto 1.6k
0
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1
reply
613
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News: List of Deprecated Packages Bioc 3.10
annotation experimentdata software deprecation release News
3.5 years ago • updated 3.4 years ago shepherl 3.4k
1
vote
5
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791
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News: Final List of Deprecated Package Bioc 3.9
deprecation release software experimentData News
3.9 years ago • updated 3.6 years ago shepherl 3.4k
0
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0
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459
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Job: Software Developer - BC Cancer Research Center, Vancouver BC
software bioinformatics sequecing Job
3.6 years ago jmaanaki • 0
0
votes
3
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608
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News: List of Deprecated Packages Bioc 3.10
annotation experimentdata software release deprecation News
3.7 years ago shepherl 3.4k
0
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1
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481
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News: Initial List of Deprecated Packages Bioc 3.10
software experimentdata release deprecation annotation News
3.7 years ago shepherl 3.4k
0
votes
1
reply
757
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News: List of Deprecated Package Bioc 3.9
deprecate release devel software experimentdata News
4.0 years ago shepherl 3.4k
0
votes
1
reply
783
views
Meta_analysis of different platforms of microarray data
microarray meta analysis cancer Software R
updated 4.1 years ago by 62k • written 4.1 years ago by • 0
0
votes
1
reply
622
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News: List of Deprecated Package Bioc 3.9
deprecate release software devel News
4.1 years ago shepherl 3.4k
0
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0
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697
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News: DEADLINE: All packages to pass R CMD build and R CMD check
release software experimentdata workflows News
4.8 years ago shepherl 3.4k
0
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8
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1.5k
views
How to use the QUIDE-seq R/python package to remove non-genomic DNA sequences?
annotation software software error
updated 6.6 years ago by ★ 4.3k • written 6.7 years ago by ▴ 10
1
vote
3
replies
1.2k
views
Are there any bioconductor github mirrors for data packages?
software bioc-devel developers R
updated 7.3 years ago by ★ 8.2k • written 7.3 years ago by • 0
2
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3
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2.2k
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package for sex determination using sam/bam files
software sex package
7.3 years ago Pau Marc Muñoz Torres ▴ 20
0
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0
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1.5k
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Job: Harvard Medical School: Jr. Software Engineer/Biomedical Informatician
software engineer bioinformatician job Job
8.3 years ago Doe, Aimee ▴ 40
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0
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1.1k
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News: The NIH Software Discovery Index | We invite your comments
software NIH index News
8.3 years ago Sean Davis 21k
43 results • Page 1 of 1
Recent ...
Replies
Comment: TCGA: clinical data and expression data by sharifnstu1203002m • 0
Hello, I am in the same problem. I downloaded "transcriptome profiling" data of TCGA by using the Bioconductor package. I get my gene expr…
Comment: How to normalize long-read RNA-seq data for comparison with short-reads by Jonathan Göke ▴ 40
Great to hear that you are using Bambu. Yes, I think that part of your question does not have one correct answer, there are many ways in wh…
Answer: Library sizes of miRNA sequencing data and TMM normalization with Edge-R by Gordon Smyth 47k
Choosing which samples to normalize together is not dependent on library size but rather on (1) whether the tissue samples are comparable a…
Comment: Atena package - error (new user) by lalanis1 • 0
Thanks a lot, Calvo. Will run my files with revised version soon! Best regards, Lalani
Comment: Nested paired design with covariates in limma by Gordon Smyth 47k
Please post a new question with enough detail to answer your question. If you want bespoke advance, then you need to post the details of yo…
Votes
Comment: How to normalize long-read RNA-seq data for comparison with short-reads
Answer: Library sizes of miRNA sequencing data and TMM normalization with Edge-R
C: Can't install TopmedPipeline Package
Comment: Question about GWASTools gdsSubset
Comment: How to normalize long-read RNA-seq data for comparison with short-reads
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