Biostar DNA

Showing : DNA • reset

votes

replies

132

views

DNA repeats

7 weeks ago me-nobody • 0

votes

365

views

TFBSTools DNASeqData readFASTA DNA RStudio

updated 16 months ago by James W. MacDonald 62k • written 16 months ago by HELEN • 0

vote

613

views

software codon usage bias dna

updated 3.3 years ago by anamaria ▴ 10 • written 3.3 years ago by jol.espinoz ▴ 40

votes

377

views

DNA alphabet

updated 4.0 years ago by James W. MacDonald 62k • written 4.0 years ago by fjia304 • 0

votes

replies

1.2k

views

decipher DNA biostrings

updated 5.3 years ago by Erik Wright ▴ 150 • written 5.3 years ago by reubenmcgregor88 • 0

votes

replies

1.9k

views

biostrings mask repeatmasker DNA

updated 2.2 years ago by ivantsers • 0 • written 5.4 years ago by beausoleilmo • 0

votes

993

views

ABI sequence DNA melting curve

updated 7.8 years ago by Hervé Pagès 16k • written 7.8 years ago by Prasanth ▴ 20

7 results • Page 1 of 1

Recent ...

Replies

Comment: How to extract proteins from PCs in plot_pca in DEP package by Basti ▴ 700

Which information do you want precisely ? plot_pca is just a wrapper for PCA visualization, but it applies prcomp to perform PCA : https://…

Comment: [limma::kegga] Pathway names all NA by Gordon Smyth 47k

The reason why installing limma didn't solve the problem was because you were using Bioconductor 3.15 rather than the current release, whic…

Comment: [limma::kegga] Pathway names all NA by andrewsm • 0

Thank you Gordon for the quick response. I saw something along those lines in the NEWS notes so did try ```{r} BiocManager:install("limma"…

Comment: Time-course, comparison of two groups by Gordon Smyth 47k

With 4 time points there are 3 df between time points, so your spline analysis with `df=3` is exactly the same as if you had treated time a…

Comment: Does DiffBind make consensus peaks sets for samples from a given condition (e.g. by tahir.msajid • 0

Hi Rory, I am normalizing the counts with the following options: `normalized <- dba.normalize(counts, method=DBA_DESEQ2, normalize = DBA_N…

Votes

Comment: Scaling DEXSeq estimateDispersions for large datasets, glmGamPoi?

Answer: minfi support of illumina Infinium methylationEPIC v2.0

Answer: Are polynomial contrasts for a time factor possible in DESeq2?

Are polynomial contrasts for a time factor possible in DESeq2?

Answer: How to deal with the negative values from EBPlusPlusAdjustPANCAN_IlluminaHiSeq_R

Awards • All

Popular Question to Guido Hooiveld ★ 3.6k

Scholar to Gordon Smyth 47k

Popular Question to Robert Castelo ★ 3.0k