Bioconductor EBayes

Showing : eBayes • reset

votes

replies

2.0k

views

topTable MicroarrayData ebayes limma Microarray

5.0 years ago snijesh ▴ 200

votes

replies

2.1k

views

limma eBayes decideTests topTable

updated 6.0 years ago by Gordon Smyth 53k • written 6.0 years ago by irene.roman • 0

votes

replies

2.8k

views

limma eBayes

updated 7.0 years ago by Gordon Smyth 53k • written 7.0 years ago by Sebastian Hesse ▴ 70

votes

2.3k

views

Limma ebayes bayesian ls

updated 21 months ago by Gordon Smyth 53k • written 7.3 years ago by CantExitVIM ▴ 10

vote

replies

2.4k

views

model.matrix lmFit eBayes GEOquery limma

8.0 years ago darthratus • 0

vote

replies

1.9k

views

ebayes limma bioconductor

updated 8.3 years ago by Gordon Smyth 53k • written 8.3 years ago by reventropy2003 ▴ 10

votes

replies

2.9k

views

ebayes limma

8.3 years ago peirinl • 0

vote

replies

2.2k

views

eBayes limma error

updated 8.6 years ago by James W. MacDonald 68k • written 8.6 years ago by calen.p.ryan • 0

votes

replies

2.1k

views

ebayes limma voom

9.0 years ago bag59 • 0

votes

replies

2.6k

views

limma ebayes

updated 2.8 years ago by Gordon Smyth 53k • written 9.1 years ago by cemcdono • 0

vote

1.3k

views

limma ebayes

updated 10.3 years ago by Aaron Lun ★ 29k • written 10.3 years ago by bharata1803 ▴ 60

votes

replies

2.2k

views

limma ebayes statistical inference

updated 10.5 years ago by Gordon Smyth 53k • written 10.5 years ago by ssrajan86 • 0

votes

1.7k

views

limma eset error ebayes

updated 10.6 years ago by James W. MacDonald 68k • written 10.6 years ago by Vani ▴ 20

votes

replies

2.4k

views

ebayes expression affymetrix pd.hugene.2.0.st limma

updated 11.1 years ago by Gordon Smyth 53k • written 11.1 years ago by Paulo Nuin ▴ 200

14 results • Page 1 of 1

Recent ...

Replies

Answer: Subsetting data verses contrasts [DESeq2]? by ATpoint ★ 5.0k

This has been asked many times before, please search for relevant posts. In short: Generally it is least tedious to not split the data and …

Comment: Bulk RNAseq analysis for by Mariami • 0

Thank you so much for your help! will try to proceed with the suggestion

Comment: Bulk RNAseq analysis for by Mariami • 0

Thank you for the explanation. I understand, although at the moment we are limited in our ability to increase N. My concern came from the o…

Answer: Bulk RNAseq analysis for by Gordon Smyth 53k

All three packages allow paired comparisons, where the clone is the "pair". limma moreover allows mixed models (just run `voomLmFit` with `…

Answer: Bulk RNAseq analysis for by James W. MacDonald 68k

In my experience, the within-clone variability of differentiated stem cells is often as large or larger than the between-clone variability,…

Votes

Comment: Are transformed values from rlog /vst log2 normalized counts?

Are transformed values from rlog /vst log2 normalized counts?

Answer: Bulk RNAseq analysis for

Answer: DiffBind differential analysis

Answer: Limma-voom sample weights and impact on DEG numbers

Awards • All

Popular Question to James W. MacDonald 68k