Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
eBayes
•
reset
9
votes
4
replies
2.0k
views
Limma outputs different results for same sample?
topTable
MicroarrayData
ebayes
limma
Microarray
4.9 years ago
snijesh
▴ 200
0
votes
5
replies
2.0k
views
eBayes options and decideTests method
limma
eBayes
decideTests
topTable
updated 5.8 years ago by
Gordon Smyth
53k • written 5.8 years ago by
irene.roman
• 0
0
votes
6
replies
2.8k
views
eBayes(fit_object, trend = T) gives: Error in fitFDist(var, df1 = df, covariate = covariate) : NA covariate values not allowed
limma
eBayes
updated 6.8 years ago by
Gordon Smyth
53k • written 6.8 years ago by
Sebastian Hesse
▴ 70
3
votes
1
reply
2.3k
views
Limma without eBayes, is it indistunguishable from Ordinary Least Square?
Limma
ebayes
bayesian
ls
updated 19 months ago by
Gordon Smyth
53k • written 7.2 years ago by
CantExitVIM
▴ 10
1
vote
7
replies
2.3k
views
model.matrix from GDS data
model.matrix
lmFit
eBayes
GEOquery
limma
7.8 years ago
darthratus
• 0
1
vote
2
replies
1.9k
views
Limma Ebayes on SILAC data
ebayes
limma
bioconductor
updated 8.1 years ago by
Gordon Smyth
53k • written 8.1 years ago by
reventropy2003
▴ 10
0
votes
6
replies
2.9k
views
Error in last step of Limma analysis (eBayes)
ebayes
limma
8.2 years ago
peirinl
• 0
1
vote
3
replies
2.1k
views
Error from eBayes in limma package
eBayes
limma
error
updated 8.4 years ago by
James W. MacDonald
68k • written 8.4 years ago by
calen.p.ryan
• 0
2
votes
2
replies
2.0k
views
Can one get LSMeans and expression confidence intervals from limma and voom?
ebayes
limma
voom
8.8 years ago
bag59
• 0
4
votes
2
replies
2.5k
views
error in Limma analysis - estimated df (df.0) for prior value of variance (s2.post) is Inf
limma
ebayes
updated 2.7 years ago by
Gordon Smyth
53k • written 8.9 years ago by
cemcdono
• 0
1
vote
1
reply
1.3k
views
Limma ebayes function error without any messages
limma
ebayes
updated 10.1 years ago by
Aaron Lun
★ 29k • written 10.1 years ago by
bharata1803
▴ 60
3
votes
3
replies
2.2k
views
Sub : Limma ebayes
limma
ebayes
statistical inference
updated 10.4 years ago by
Gordon Smyth
53k • written 10.4 years ago by
ssrajan86
• 0
0
votes
1
reply
1.7k
views
LmFit and eBayes on merged ESET giving errors
limma
eset
error
ebayes
updated 10.5 years ago by
James W. MacDonald
68k • written 10.5 years ago by
Vani
▴ 20
6
votes
5
replies
2.4k
views
Limma ebayes returns a list with Affy pd.hugene.2.0.st arrays
ebayes
expression
affymetrix
pd.hugene.2.0.st
limma
updated 11.0 years ago by
Gordon Smyth
53k • written 11.0 years ago by
Paulo Nuin
▴ 200
14 results • Page
1 of 1
Recent ...
Replies
Comment: Limma-voom sample weights and impact on DEG numbers
by
rosarygaseous
• 0
I have faced similar issues before, and often the problem comes down to package versions or R/Bioconductor compatibility. Make sure your R …
Comment: nice 3D displays for PCA analysis
by
adam80haynes
• 0
That's a fascinating application of 3D printing in a scientific context. Using this technology to create custom lab equipment, models of mo…
Comment: Bioinformatician at the Lausanne University Hospital
by
TikTsokaasocissalpc
• 0
The Random Word Generator in Italian is a useful tool for generating ideas and exploring new approaches, much like the innovative research …
Comment: DECIPHER DesignProbes unable to design FISH-probes
by
TikTsokaasocissalpc
• 0
If you want to share your research progress and microbiome discoveries with colleagues or friends, [snaptroid android][1] download free mak…
Answer: Limma-voom sample weights and impact on DEG numbers
by
Gordon Smyth
53k
I recommend that you always use voomLmFit() instead of the earlier voom() or voomWithQualityWeights() functions. Personally, I would use sa…
Votes
Limma-voom sample weights and impact on DEG numbers
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Awards
• All
Popular Question
to
Gordon Smyth
53k
Popular Question
to
Vincent J. Carey, Jr.
6.7k
Popular Question
to
Istvan Albert
▴ 50
Popular Question
to
Dario Strbenac
★ 1.6k
Scholar
to
Nikos Ignatiadis
▴ 180
Locations
• All
The city by the bay,
29 minutes ago
United States,
1 hour ago
United States,
2 hours ago
United States,
3 hours ago
United States,
4 hours ago
Traffic: 985 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6