Showing : evolution • reset
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Job: Post-Doc: Development of a new method to study the distribution of the effect sizes of QTL
StatisticalMethod Evolution QuantitativeTrailLocus Genetics JobPosting
18 months ago pierre.devillemereuil • 0
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Job: PhD-position in bioinformatics / computational biology
Mergeomics Epigenome Evolution NGS Aging
20 months ago arne.sahm • 0
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Job: PostDoc in Computational Biology at Leibniz Institute for Environmental Medicine
Aging Epigenome Bioinformatics Mergeomics Evolution
2.6 years ago arne.sahm • 0
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Job: PhD student position: Vertebrate brain origins and evolution
PhD single-cell ComparativeGenomics evolution
4.2 years ago henrik.kaessmann • 0
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Job: Bioinformatics postdoc in comparative genomics
single-cell evolution Genomics Postdoc
4.2 years ago henrik.kaessmann • 0
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Job: Postdoc in Population Genomics - UC Davis
bioinformatics evolution sequencing genome analysis genomics Job
7.1 years ago hschmidt • 0
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display of synteny regions across multiple species
synteny translocation evolution conservation
7.4 years ago Bogdan ▴ 670
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Job: Post-doc in mathematical modeling on phenotypic evolution and embryonic development
job computational biology simulation evolution Gene network Job
8.4 years ago isaac.salazar • 0
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Job: postdoc 3yrs bioinformatics bacterial population genomics: Wellington, New Zealand
bacteria evolution population genomics Job
8.4 years ago una.ren • 0
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Job: Two Postdoc Positions in Evolutionary Single-Cell Genomics (experimental and computational)
evolution single-cell development differentiation cool Job
9.4 years ago Wolfgang Huber ★ 13k
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Job: Bioinformatics Postdoc in Functional Evolutionary Genomics, Heidelberg, Germany
rnaseq genomics evolution Job
9.7 years ago henrik.kaessmann • 0
11 results • Page 1 of 1
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Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Michael Love 43k
BTW, I tested with no issue on MacOS ARM on our previous github issue.
Answer: DESeq(dds, parallel=TRUE) wrong args for environment subassignment by Michael Love 43k
The DESeq2 error makes sense, as we've talked about, given that the simple `bplapply` isn't working in your setup. Maybe give the traceb…
Answer: PTM analysis in LIMPA by Gordon Smyth 53k
For PTM analysis, the usual quantification command dpcQuant() is replaced by dpcImpute(). Otherwise the limpa pipeline is the same as for a…
Answer: problem reading bam files into nucleR by James W. MacDonald 68k
The first step is to update to the current versions of R/Bioconductor and try again. It's possible that you have run into a bug that's alre…
Answer: Question about DESeq2 Design for Paired Treatment Study by ATpoint ★ 5.0k
It's a paired analysis so you don't need any patient-specific covariates such as age and sex. What you call batch effect might just be the …
Votes
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
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Popular Question to Hervé Pagès 16k
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Popular Question to James W. MacDonald 68k
Popular Question to shepherl 4.2k
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