Bioconductor Gene set enrichment

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3.1k

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DOSE clusterprofiler annotation gene ontology gene set enrichment

updated 6.0 years ago by Guangchuang Yu ★ 1.2k • written 6.0 years ago by kirannbishwa01 • 0

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2.9k

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limma goana gene set enrichment

6.0 years ago emy_66 • 0

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2.3k

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topgo gene ontology gene set enrichment rna-seq bioinformatics

updated 6.9 years ago by Lluís Revilla Sancho ▴ 720 • written 7.2 years ago by fromhj304 ▴ 10

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2.2k

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limma camera gene set analysis gene set enrichment

updated 6.8 years ago by Gordon Smyth 48k • written 6.8 years ago by natalia.pietrosemoli • 0

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1.9k

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rna-seq bioinformatics gene ontology gene set enrichment go

updated 7.2 years ago by Guangchuang Yu ★ 1.2k • written 7.2 years ago by fromhj304 ▴ 10

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1.7k

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limma edger barcodeplot gene set enrichment mroast

updated 5.8 years ago by Gordon Smyth 48k • written 5.8 years ago by srmaruyama • 0

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1.2k

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camera limma gene set analysis gene set enrichment

updated 5.1 years ago by Gordon Smyth 48k • written 5.1 years ago by emeline.perthame • 0

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1.2k

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gene ontology go analysis gene set enrichment gene set analysis News

updated 6.3 years ago by Martin Morgan 25k • written 6.3 years ago by triZZla • 0

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1.1k

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gsva plage differential expression gene set enrichment

4.9 years ago krassowski.michal ▴ 40

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986

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gene set analysis gene set enrichment limma

updated 5.2 years ago by Gordon Smyth 48k • written 5.2 years ago by jaynishshah • 0

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948

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gene set enrichment KEGG

updated 5.8 years ago by Lluís Revilla Sancho ▴ 720 • written 5.8 years ago by RMRG ▴ 10

11 results • Page 1 of 1

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Comment: Problem loading HDF5Array in R 4.3.2 by Mike Smith ★ 6.2k

Great, I'm glad it worked. It's frustrating that the binary doesn't work for you; that shouldn't happen! However I'm not sure how to go a…

Comment: It's possible to use clusterProfiler without an annotationDBI package by Guido Hooiveld ★ 3.8k

No, I don't. Confirm that `geneList` has the expected format. What is the outcome of `geneList[1:5]`, `str(geneList)` and `class(geneList)…

Comment: It's possible to use clusterProfiler without an annotationDBI package by Guido Hooiveld ★ 3.8k

Did you try it yourselves? But the answer is yes.

Comment: It's possible to use clusterProfiler without an annotationDBI package by nromerov • 0

Also do you know if the gaphical functions as dotplot, enrichmap and cnetplot works on this generic analysis? still sorry for bothering you

Comment: It's possible to use clusterProfiler without an annotationDBI package by nromerov • 0

Thank you very much for your help iu was really deseperate about this that i wasn't thinking too well yesterday im really gratefull with yo…

Votes

Comment: Problem loading HDF5Array in R 4.3.2

Answer: gseGO input list

Comment: Problem loading HDF5Array in R 4.3.2

Answer: tximport: Error in is(txi, "list") : argument "txi" is missing, with no default

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