Bioconductor Gene set enrichment

Showing : gene set enrichment • reset

votes

replies

3.9k

views

DOSE clusterprofiler annotation gene ontology gene set enrichment

updated 6.9 years ago by Guangchuang Yu ★ 1.2k • written 6.9 years ago by kirannbishwa01 ▴ 20

votes

replies

3.4k

views

limma goana gene set enrichment

6.9 years ago emy_66 • 0

vote

replies

2.8k

views

topgo gene ontology gene set enrichment rna-seq bioinformatics

updated 7.7 years ago by Lluís Revilla Sancho ▴ 750 • written 8.0 years ago by fromhj304 ▴ 10

votes

replies

2.7k

views

limma camera gene set analysis gene set enrichment

updated 7.6 years ago by Gordon Smyth 51k • written 7.6 years ago by natalia.pietrosemoli • 0

vote

replies

2.4k

views

rna-seq bioinformatics gene ontology gene set enrichment go

updated 8.0 years ago by Guangchuang Yu ★ 1.2k • written 8.0 years ago by fromhj304 ▴ 10

votes

replies

2.0k

views

limma edger barcodeplot gene set enrichment mroast

updated 6.7 years ago by Gordon Smyth 51k • written 6.7 years ago by srmaruyama • 0

votes

replies

1.7k

views

camera limma gene set analysis gene set enrichment

updated 5.9 years ago by Gordon Smyth 51k • written 5.9 years ago by emeline.perthame • 0

vote

1.4k

views

gsva plage differential expression gene set enrichment

5.7 years ago krassowski.michal ▴ 40

votes

1.3k

views

gene ontology go analysis gene set enrichment gene set analysis News

updated 7.1 years ago by Martin Morgan 25k • written 7.2 years ago by triZZla • 0

vote

1.2k

views

gene set enrichment KEGG

updated 6.6 years ago by Lluís Revilla Sancho ▴ 750 • written 6.6 years ago by RMRG ▴ 10

vote

replies

1.2k

views

gene set analysis gene set enrichment limma

updated 6.0 years ago by Gordon Smyth 51k • written 6.0 years ago by jaynishshah • 0

11 results • Page 1 of 1

Recent ...

Replies

Comment: RNA-Seq p value range variation by paul.meraner • 0

Thanks - all I wanted to hear (and I believe that is what you are saying) is that it is not concerning if p value ranges between two very s…

Answer: RNA-Seq p value range variation by Michael Love 42k

The adjusted p-values are really just for thresholding at some value and giving you a bounded set. Whether it's 1e-10 or 1e-100, it's j…

Comment: miRTarRnaseq library by mercedeh.movassagh ▴ 20

Hi Maria, so what is the code you are using? By the 3rd way to conduct the analysis do you mean looking at the interaction model from part …

Comment: miRTarRnaseq library by María Calvo • 0

Hello, in line with the previous questions, when the miRNA-mRNA interaction analysis is performed (3 rd way to conduct the analysis), I obt…

Answer: heatmap with batch effect by James W. MacDonald 67k

You have only one condition in the second batch, so it's not possible to remove the batch effect. You can probably adjust for it somewhat, …

Votes

Answer: How to control batch effect if Group and batch are same?

Comment: Convert HGVS Representation back to Reference Genome Coordinates

Answer: How to control batch effect if Group and batch are same?

Awards • All

Popular Question to Andrew_McDavid ▴ 270

Scholar to Ryan C. Thompson ★ 7.9k