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genomeinfodbdata
•
reset
0
votes
14
replies
4.1k
views
GenomeInfoDbData had non-zero exit status
DESeq2
RStudio
GenomeInfoDbData
hadnon-zeroexitstatus
updated 19 months ago by
wshao9
• 0 • written 22 months ago by
JoseR
• 0
2
votes
10
replies
1.3k
views
can't open mghp.osn.xsede.org
GenomeInfoDbData
genomeinfodbdata
updated 8 months ago by
James W. MacDonald
65k • written 8 months ago by
15753563659
▴ 50
8
votes
9
replies
1.1k
views
All three of the sites where genomeinfodbdata R packages are stored appear to be down.
GenomeInfoDbData
8 months ago
15753563659
▴ 50
1
vote
7
replies
17k
views
Dada2 and GenomeInfoDbData installation
dada2
GenomeInfoDbData
updated 6.8 years ago by
jiangjing_ing
• 0 • written 6.9 years ago by
navlern
• 0
1
vote
7
replies
4.5k
views
installation of package ‘GenomeInfoDbData’ had non-zero exit status
GenomeInfoDbData
"GenomeInfoDbData"package
updated 2.2 years ago by
Hervé Pagès
16k • written 3.5 years ago by
N.D.Hubot
• 0
0
votes
6
replies
1.5k
views
GenomeInfoDbData not available for Mac
bioconductor
GenomeInfoDbData
5.8 years ago
svetlana.gorokhova
• 0
1
vote
5
replies
1.3k
views
Unable to load mm10 genome for use with GenomicDistributions package
GenomeInfoDb
GenomeInfoDbData
GenomicDistributionsData
GenomicDistributions
22 months ago
rashford
• 0
0
votes
4
replies
1.8k
views
Cannot install Phyloseq and dada2
GenomeInfoDbData
phyloseq
dada2
2.3 years ago
ymtan
• 0
1
vote
4
replies
4.0k
views
GenomeInfoDb’ could not be loaded or installed
GenomeInfoDbData
3.1 years ago • updated 3.0 years ago
ettore64
▴ 10
0
votes
3
replies
1.6k
views
I cannot install "microbiome"
GenomeInfoDbData
microbiome
phyloseq
updated 21 months ago by
Marcel Ramos
690 • written 21 months ago by
kikiki
• 0
0
votes
2
replies
984
views
Error when installing pcaExplorer
install
GenomeInfoDbData
updated 4.0 years ago by
James W. MacDonald
65k • written 4.0 years ago by
lina.bird
• 0
0
votes
1
reply
723
views
package ‘GenomeInfoDb’ could not be loaded
GenomeInfoDb
GenomeInfoDbData
updated 14 months ago by
ATpoint
★ 4.1k • written 14 months ago by
exferin
• 0
0
votes
1
reply
1.8k
views
Issue using ballgown
software error
ballgown
genomeinfodbdata
genomeinfodb
updated 5.6 years ago by
James W. MacDonald
65k • written 5.6 years ago by
dualeahmed
• 0
0
votes
1
reply
387
views
GenomeInfoDbData version 1.2.9
GenomeInfoDbData
updated 6 months ago by
shepherl
3.9k • written 6 months ago by
remi.trimbour
• 0
0
votes
0
replies
607
views
Error installing GenomeInfoDbData in order to run DESeq2
genomeinfodbdata
updated 5.2 years ago by
Martin Morgan
25k • written 5.2 years ago by
hdwhitti
• 0
15 results • Page
1 of 1
Recent ...
Replies
Comment: Cannot connect to ExperimentHub server
by
Jiayu
• 0
Many thanks and it also resolved the same issue for me!
Comment: Help with running egsea()
by
Chris
• 0
I tried egsea.ma and got this error: gsa = egsea.ma(numeric_matrix, vector_group, probe_annotation, contrasts = contrast_matrix, gs.an…
Comment: Getting Error in hclust(d, method = method): NA/NaN/Inf in foreign function call
by
angelathuynh5
• 0
Thank you for your response. To clarify, the process of making a heatmap performs rowscaling so it takes the value - (mean/std). And to res…
Comment: Method to find pathways different between 2 groups
by
Gordon Smyth
50k
sigPathway is another method that does not account for inter-gene correlation and which gives inflated significance, as we showed in our 20…
Answer: error in limma , contrast.matrix Number of rows of contrast matrix must match nu
by
James W. MacDonald
65k
I doubt you have that many contrasts. I think that is probably the number of rows. What does `dim(fit)` return (and `head(fit$coef)`)?
Votes
A: Error in DESeqDataSet : some values in assay are not integers
Answer: Cannot connect to ExperimentHub server
Answer: confused with tximport counts abundance using salmon input
Answer: Getting Error in hclust(d, method = method): NA/NaN/Inf in foreign function call
Answer: error in limma , contrast.matrix Number of rows of contrast matrix must match nu
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